Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2351 116 5e-21 seq361 107 3e-18 seq4065 102 1e-16 >seq2351 Length=162851 Score = 116 bits (128), Expect = 5e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 78753 TTTTTTGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 |||||||||||||| || ||||||||||| |||||||| || || || || |||||||| Sbjct 147490 TTTTTTGTTTCCTTATGAAGATTAGATACGGCTATTCTCGCGGCAAGTATGGCATAATCT 147431 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 || || | || || ||| |||||| ||||||| || ||| |||| | ||| | |||| Sbjct 147430 GGGTGCTTCGTTGTCATAGTTGCTGCTGTTTCTGCTGCCAAATTATCCAGCTCAACAGTT 147371 Query 78873 GTGACCCCATTATATAGTCCTTGAATAACTTT 78904 || |||||| ||||| || |||||||| Sbjct 147370 GTTACCCCAGAATATAAACCACTGATAACTTT 147339 Score = 113 bits (124), Expect = 6e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||| || || |||||| |||| | || ||||||| ||| |||||||| || | Sbjct 160858 TCAAACTCTTCACCCCAACAATCAGCTAAGCCAGGGCTCTCACGGGGGCACATTAAACTC 160799 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || |||||| || ||| || ||||| || | |||||| ||||| || ||| || Sbjct 160798 CAAACACCATTGCTCTCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGCATAGAAG 160739 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||| || | ||| || || || ||||| |||||||| | ||| | |||||| | Sbjct 160738 AGATCACGAGCTCTGACCTCCTCCTTCCCTGTGTTCTTTTTCAAATCTAAAAACTCAAAG 160679 Query 78105 ATATCAGAATGCCATGGTTC 78124 |||||||||||||| ||||| Sbjct 160678 ATATCAGAATGCCACGGTTC 160659 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/218 (70%), Gaps = 9/218 (4%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||| || |||| ||||| |||||||| ||||| |||| | ||| |||| Sbjct 158021 TTATTTCCTCCTTGGTCTACATATCGAGCGGTGTTGTTATACACTCGAAGCATAGGAACT 157962 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | ||| || || | ||||| || ||||| || ||||| ||| |||| | ||| | Sbjct 157961 ACACCATTGGAAATACCATTGGTGCCAGATATGTAACTGCCAGTTGCTCTAATGC----A 157906 Query 78273 ATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328 || |||| ||| || ||||| || ||| || | | || || | | | ||| Sbjct 157905 GTGTATATTCAGCCCAATGCCTCCAGCAGACTTGGACACCAATGCACATTGCCTTAGTGT 157846 Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCA-TGTTA 78365 || ||||||||||| || |||||||| ||| ||||| Sbjct 157845 GTCATAGATACCCTCAATGCTGTCATCTTTCATTGTTA 157808 >seq361 Length=596180 Score = 107 bits (118), Expect = 3e-18 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 || || ||||| |||||||| || || | |||| || | ||||||||| |||||||| Sbjct 1365 GACCCTTTATAGGTTTCATAGGGACCGTACTTTTCTGCAAATTCACAACTTGCTTCCAAG 1306 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || || || ||||| ||||| || |||||||| || | || | || | ||| ||| Sbjct 1305 GCACCATAGTAAATAGTTTCAAATATCTTCTTGTTCAAGTCCCGAGCACCCTCACTGTCA 1246 Query 77475 AACGGATAATGTAA--AAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAG 77532 || || || | | |||| |||| || || || || ||||| ||||||||||| | Sbjct 1245 AAAGGC-AACCTCATTAAGATGAAAGTG-TCAGCCAACCCTTGAACACCAATACCAATGG 1188 Query 77533 GTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAA 77568 ||||||||||| |||| || | || || |||||| Sbjct 1187 GTCTATGTCTCATATTTGACAACTTGGC--CTGGAA 1154 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 || |||||||| || | || || | ||||||||| || || |||||||| | || Sbjct 1708 TGGAATTCTCCTGAGAGGACCCTCCTAGTGTAAATGTTTGATGTGTATGGTTCGATTGAC 1649 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCA 77235 |||||||| |||||||||||||| |||||||| || ||||||||||||| Sbjct 1648 TCATTGTTCCCCAAAATTTGAGCTGTAGAAGCTGTGGGCATAGGTGCCA 1600 >seq4065 Length=69253 Score = 102 bits (112), Expect = 1e-16 Identities = 129/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTA-TACATTTCGGAGTGAATATTTTCAATTG 48459 |||||||| ||||||||| || | | || | |||||||| || || | |||||| |||| Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTA-ACGAGTACATTTCTGAATGCACATTTTCCATTG 27707 Query 48460 CCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTT 48519 | ||||| || || |||||||| | |||||| | || |||||||| | || | || Sbjct 27706 CAATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTT 27647 Query 48520 CAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATG 48574 | | | ||| || || || || ||||| |||||||||||| || | |||||| Sbjct 27646 CCACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACATG 27592 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034 ||| ||||| || || |||||||| ||| | |||| ||||| || || | | || Sbjct 28518 ATCAGCAACAAACTCAATATATCTGCACATGAGAACACAGTTCATACCAATCATGTCTAC 28459 Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGT 48094 ||||| || || || | || || ||||| || | ||||| || || || ||| Sbjct 28458 TGGTAATGCATCTGTCAAGAATTCCTGTTCAATGGCCACAGCCTCTCTTACGATGCTTGT 28399 Query 48095 TACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACA 48154 || | |||| | | | || ||| | || |||||||||||||| ||| |||||||| || Sbjct 28398 TATCTTTTCGTTAGTCGGACGATTGACCAGATGTTTAAACATTAGACAAGCAAAATCGCA 28339 Query 48155 ATGAAGACC 48163 |||||| || Sbjct 28338 ATGAAGGCC 28330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694591552829440