Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2351 104 3e-17 seq361 102 1e-16 seq4065 93.3 6e-14 >seq2351 Length=162851 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || |||||| |||| | || ||||| | ||| || ||||| || | Sbjct 160858 TCAAACTCTTCACCCCAACAATCAGCTAAGCCAGGGCTCTCACGGGGGCACATTAAACTC 160799 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || |||||| || ||| || ||||| || | |||||| ||||| || ||| || Sbjct 160798 CAAACACCATTGCTCTCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGCATAGAAG 160739 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| || | ||| || || || ||||| |||||||| | ||||| ||||| | Sbjct 160738 AGATCACGAGCTCTGACCTCCTCCTTCCCTGTGTTCTTTTTCAAATCTAAAAACTCAAAG 160679 Query 76700 ATATCAGAATGCCATGGTTC 76719 |||||||||||||| ||||| Sbjct 160678 ATATCAGAATGCCACGGTTC 160659 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 || || | |||| || || ||| | |||||||||| ||||||||| ||||||||||| Sbjct 157622 CTTGAGAGTTGAGGACGAGGTGTTGCAGCATTAAACAGTGTAGGAGAAGCATGAGTGAAG 157563 Query 77033 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATT 77092 | ||||| | ||||| || || ||||| | || || | |||| ||| | | Sbjct 157562 AAGCGCTCAGACAAGAGATTATAAGTCTCAATGGCAGCATCCACATCCTCACCATGGACT 157503 Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 || |||| |||||||||| ||| |||||||| ||||| ||| Sbjct 157502 CCGACAGAAACACGCATCAGCATGTGCTGAGGACGTTCCACA 157461 Score = 89.7 bits (98), Expect = 7e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 77348 TTTTTTGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 |||||||||||||| || ||||| |||||||||||||| || || || || ||||| || Sbjct 147490 TTTTTTGTTTCCTTATGAAGATTAGATACGGCTATTCTCGCGGCAAGTATGGCATAATCT 147431 Query 77408 GGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTA 77467 || || | || || || |||||| ||||||| || ||| |||| | || | ||| Sbjct 147430 GGGTGCTTCGTTGTCATAGTTGCTGCTGTTTCTGCTGCCAAATTATCCAGCTCAACAGTT 147371 Query 77468 GTAACTCCGTTATATAGCCCTTGAATAACTTT 77499 || || || ||||| || |||||||| Sbjct 147370 GTTACCCCAGAATATAAACCACTGATAACTTT 147339 >seq361 Length=596180 Score = 102 bits (112), Expect = 1e-16 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 || || ||||| ||||| || | |||| |||||| || | ||| ||||| || || || Sbjct 1365 GACCCTTTATAGGTTTCATAGGGACCGTACTTTTCTGCAAATTCACAACTTGCTTCCAAG 1306 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 ||||| || ||||| ||||| || |||||||| || | || | || | ||| ||| Sbjct 1305 GCACCATAGTAAATAGTTTCAAATATCTTCTTGTTCAAGTCCCGAGCACCCTCACTGTCA 1246 Query 76070 AAAGGATAATGTAA--AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAG 76127 ||||| || | | |||| ||| | || || | || ||||| ||||||||||| | Sbjct 1245 AAAGGC-AACCTCATTAAGATGAAA-GTGTCAGCCAACCCTTGAACACCAATACCAATGG 1188 Query 76128 GTCTATGTCTCTTATTGGA 76146 ||||||||||| |||| || Sbjct 1187 GTCTATGTCTCATATTTGA 1169 Score = 93.3 bits (102), Expect = 6e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || |||||||| || | || || | ||||||||| || || |||||||| | || Sbjct 1708 TGGAATTCTCCTGAGAGGACCCTCCTAGTGTAAATGTTTGATGTGTATGGTTCGATTGAC 1649 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCA 75830 |||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct 1648 TCATTGTTCCCCAAAATTTGAGCTGTAGAAGCTGTGGGCATAGGTGCCA 1600 >seq4065 Length=69253 Score = 93.3 bits (102), Expect = 6e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTA-TACATTTCTGAATGAATGTTTTCAATAG 46948 |||||||| || ||||| || | | || | |||||||||||||| | ||||| || | Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTA-ACGAGTACATTTCTGAATGCACATTTTCCATTG 27707 Query 46949 CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTT 47008 | ||||| || || |||||||| | ||||| | || ||||||||| | || | || Sbjct 27706 CAATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTT 27647 Query 47009 CAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATG 47063 | | ||| || ||||| || ||||| |||||||||||| || | |||||| Sbjct 27646 CCACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACATG 27592 Score = 86.0 bits (94), Expect = 9e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || || | ||||||||| ||| | ||||| || ||||| || || || |||||||| ||| Sbjct 27452 TTCGAAAGATCTACTTCCTCAACAGTCCAAAACGACGCTTCCGCCTTCTTATACATCTTC 27393 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATA 47235 |||||||| |||| || || |||||||| || |||| || |||| | ||| | | Sbjct 27392 CATATATCGTGATACTGAATAGGAAAAATGACGAATCGTCGAGGGTTTTCTTTAAGCAAA 27333 Query 47236 GGTTC 47240 ||||| Sbjct 27332 GGTTC 27328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712855121694720