Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4065 105 7e-18 >seq4065 Length=69253 Score = 105 bits (116), Expect = 7e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || || ||||| || ||||| |||||||| ||||| | |||||| || || Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTAACGAGTACATTTCTGAATGCACATTTTCCATTGC 27706 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 |||||| || ||||||||||| | ||||| | | ||| || || | || |||| Sbjct 27705 AATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTTC 27646 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACAT 23944 | | ||||||||| ||||| ||||| ||||||||| || ||||| |||| Sbjct 27645 CACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACAT 27593 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| | | ||| | |||||| || || || || |||||||| | || | |||||| Sbjct 28144 TCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTTTA 28085 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| || | |||||||||||| || || || || || ||||| | ||||| || Sbjct 28084 AGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACGCA 28025 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693 |||| ||| ||||||||||| |||| | | |||||| Sbjct 28024 ACAATGCGTTCTCCAAATGTTGCCTTATCACTTGCAATCCA 27984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521430010534400