Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2870 114 9e-21 seq3317 109 4e-19 seq664 104 2e-17 >seq2870 Length=135571 Score = 114 bits (126), Expect = 9e-21 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 ||||| || ||||| || | ||| |||| | || |||| |||||||| ||||| || Sbjct 19948 TTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATA 19889 Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT 44269 | | ||||||||||| ||| | |||||||| ||| ||||| |||| || | Sbjct 19888 AGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCA 19829 Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 || ||||| | || ||||| |||| |||||||| || |||||||| || |||||||| Sbjct 19828 ATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAA 19769 Query 44330 ATTTGCAT 44337 || ||||| Sbjct 19768 ATCTGCAT 19761 >seq3317 Length=93551 Score = 109 bits (120), Expect = 4e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| |||||| ||||| || ||||| | |||||| || | || | |||||||| Sbjct 55707 TCTTCCAACTGCTTTCCGGCGAAAATCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTG 55766 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| ||| || ||||| || |||| ||||| | | |||||| || | |||||| Sbjct 55767 TCCTGTATTTTTGCCTTCACATTTTCTATTGTGTCAGACGCTTCCACTTCAAGCGTAATA 55826 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| | |||||||||||||| ||||| Sbjct 55827 GTCTTTCCCGTCAAAGTCTTCACGAAGATCTGCAT 55861 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 44203 AAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA 44262 |||||| | |||||||| || | || | |||||||| ||| ||||| ||| | Sbjct 53774 AAAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC 53833 Query 44263 TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322 | |||| ||||| | || ||||||||| | ||| || ||||| || ||||||||||| Sbjct 53834 ATTCTCTATCGTGTCAGAGGGTTCCACCTCTAACGTGATGGTCTTGCCAGTGAGGGTCTT 53893 Query 44323 CACGAAGATTTGCAT 44337 ||||||||| ||||| Sbjct 53894 CACGAAGATCTGCAT 53908 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 44148 CCTTT-TGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||||| || ||||||||||||| | ||| || | || || | ||||| || |||| Sbjct 66988 CCTTTCTGTATGTTGTAATCGGACAAAGTT--CGATTATCCTCTAATTGCTTTCCAGCAA 67045 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 | || || || || ||||| | ||| | |||||| || || || || ||| | Sbjct 67046 AAATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACAT 67105 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | ||||| || || | ||||| |||||||| || || || |||| Sbjct 67106 TTTCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCA 67165 Query 44325 CGAAGATTTGCAT 44337 | ||||||||||| Sbjct 67166 CAAAGATTTGCAT 67178 >seq664 Length=484775 Score = 104 bits (114), Expect = 2e-17 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || ||||||||||||| || || | || || | |||||| || ||||| | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||||||||||||| || | || | || ||||| ||| ||||| |||| | |||| Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTT-GGCTTTCACGTTC 443938 Query 44268 -CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||| | || || || |||| || || |||||||| || || |||||||| Sbjct 443937 TCAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACA 443878 Query 44327 AAGATTTGCAT 44337 || || ||||| Sbjct 443877 AATATCTGCAT 443867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359951369840832