Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq664 98.7 9e-16 seq2870 96.9 3e-15 >seq664 Length=484775 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||||||||| || ||||| || || || | || || | |||||| || || || | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-AC 41791 ||| ||||| ||||| | ||||| | |||||||||| ||| | || |||| ||| | Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCC-TGAATCTTGGCTTTCACGTTC 443938 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | ||||| | ||| || |||| || || || || || ||||||||||| || Sbjct 443937 TCAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACA 443878 Query 41852 AAAATCTGCAT 41862 || |||||||| Sbjct 443877 AATATCTGCAT 443867 >seq2870 Length=135571 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 || ||||| || ||||| ||||| |||||| | || || | ||||| || || ||||| Sbjct 19948 TTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATA 19889 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 || | ||| || || | |||| | ||||| ||| ||| | || |||| || | Sbjct 19888 AGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCC-TGAATCTTGGCTTTCACATTTTC 19830 Query 41795 ACA-GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 | ||||| | |||||| |||| || |||||||||||||| ||||| || ||||| Sbjct 19829 AATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAA 19770 Query 41854 AATCTGCATGTT 41865 ||||||||| || Sbjct 19769 AATCTGCATTTT 19758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462252591795200