Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq33365 89.7 5e-13 >seq33365 Length=5281 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 ||||| || ||||| | ||||||||||| || |||||||| || || |||| |||||| Sbjct 4414 TACATCTCAGAGTGAACATTCTCCATGGCAATTTGAAATCCATAGAAACATCTGGCTTCA 4473 Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | | ||| ||||| | |||| | ||| | |||||||| || || || || || Sbjct 4474 GTGACTTGCACTTCTTGGGAGAACCTCTCCACAAGATTTTCATTGACTATCCCATCAGAG 4533 Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCG 17419 || || || || ||||| | |||||| || |||| ||||| Sbjct 4534 GCAGCAAAGAAGGCCAAGACATGCTTTATAAAATGCCTTTCG 4575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517157123803320