Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq33365 93.3 4e-14 >seq33365 Length=5281 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || || |||| ||| ||||| || ||||| | ||||| ||||| || ||| Sbjct 4390 ATATATGTGTCTATCAACAAAGAATACATCTCAGAGTGAACATTCTCCATGGCAATTTGA 4449 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 ||||||||||| |||| || || | | ||| ||||| | | || | ||| | || Sbjct 4450 AATCCATAGAAACATCTGGCTTCAGTGACTTGCACTTCTTGGGAGAACCTCTCCACAAGA 4509 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||||| || || || ||| |||||||| || ||||| | ||||| || |||| Sbjct 4510 TTTTCATTGACTATCCCATCAGAGGCAGCAAAGAAGGCCAAGACATGCTTTATAAAATGC 4569 Query 16652 TTTTCG 16657 ||||| Sbjct 4570 CTTTCG 4575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511030525958680