Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq9515 96.9 2e-15 >seq9515 Length=717559 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 ||| || |||||| || | |||||||| || || || ||||| || || || | ||| Sbjct 249585 ATGTGCTATCATATGTGTGAGAAGAGAATAACTGGCTATATTAAATGGAACGCCCAATCC 249644 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 |||||| || ||| ||||| | ||||||| || | ||||||| ||||| ||||| Sbjct 249645 CATATCTGCACTTCTCTGATACATGAGACAGGACAGTTCTCCATCAGCTACATAGAACTG 249704 Query 97242 ACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCAC 97300 ||| || || ||||| ||||| |||||||| || || ||||| | || Sbjct 249705 TA-CAAGGCAGTGGCAGGGTGGCAATGCCATTTTCTTAAGGTCAGGTGGGTTCCACGAAC 249763 Query 97301 ACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTAT 97337 |||||| |||||||||||| ||||| || | | ||| Sbjct 249764 ACATCAGCATTCTTCTATC-ATTGGGATTATTTCTAT 249799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346530207104930