Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq48425 109 4e-19 >seq48425 Length=361859 Score = 109 bits (120), Expect = 4e-19 Identities = 293/439 (67%), Gaps = 12/439 (3%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| || | ||||||| |||||| |||||| || || ||| ||||| Sbjct 40765 GGTGATTTGGGACCCATTTATGGATCCCAATGGCGACATTACGGCGCCACGTATATTGAC 40824 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTA-CAAAATGTTATTAATTTAAT 20336 || || |||| || ||| | ||||| || | | ||| || || || Sbjct 40825 GCCAAAACTGATTACACGAACCAGGGAATCGATCAGTTGGCCGAGTGT-ATACGATTGAT 40883 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 || ||| | || || | | |||||||| | ||| |||||| | | |||||| Sbjct 40884 AAATACGGATCCGAATAATCGTAGAATTATAATGACCGCATGGAACCCCATGGATGTGGA 40943 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGA-A 20454 ||||| ||||||| || ||| || | || ||||||||||| | || | || | Sbjct 40944 CAAGATGGCGCTGCCTCCGTGCCAT-TGTTTTGTTCAATTTTACGTAG--AAAACGGAGA 41000 Query 20455 T----TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510 | | |||||||| | |||||||| || || ||||| ||||||| ||||| || Sbjct 41001 TACTCTTTCGTGTCATTTATATCAACGCAGTGCAGACATGGGTTTGGGTGTACCTTTGAA 41060 Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570 ||| | |||||| || | || | ||||||||||| ||| | |||| |||||| | Sbjct 41061 TATAACTAGTTATTGTCTATTGACTCAAATGATTGCACACGTTGCCAATTTCAAAACGTG 41120 Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630 ||| || || |||| | |||||| | ||| ||||| | ||||| | ||| || || Sbjct 41121 TGAATTTGTGTACACGACTGGAGACACTCATGTTTACTTGAATCACGTCGAAGAGTTGAA 41180 Query 20631 ATTACAGT-TAACACGACA 20648 | | |||| ||| | |||| Sbjct 41181 AATTCAGTGTAAGAGGACA 41199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398891858312305