Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq48425 109 4e-19
>seq48425
Length=361859
Score = 109 bits (120), Expect = 4e-19
Identities = 293/439 (67%), Gaps = 12/439 (3%)
Strand=Plus/Plus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| |||||||| || | ||||||| |||||| |||||| || || ||| |||||
Sbjct 40765 GGTGATTTGGGACCCATTTATGGATCCCAATGGCGACATTACGGCGCCACGTATATTGAC 40824
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTA-CAAAATGTTATTAATTTAAT 20336
|| || |||| || ||| | ||||| || | | ||| || || ||
Sbjct 40825 GCCAAAACTGATTACACGAACCAGGGAATCGATCAGTTGGCCGAGTGT-ATACGATTGAT 40883
Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396
|| ||| | || || | | |||||||| | ||| |||||| | | ||||||
Sbjct 40884 AAATACGGATCCGAATAATCGTAGAATTATAATGACCGCATGGAACCCCATGGATGTGGA 40943
Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGA-A 20454
||||| ||||||| || ||| || | || ||||||||||| | || | || |
Sbjct 40944 CAAGATGGCGCTGCCTCCGTGCCAT-TGTTTTGTTCAATTTTACGTAG--AAAACGGAGA 41000
Query 20455 T----TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510
| | |||||||| | |||||||| || || ||||| ||||||| ||||| ||
Sbjct 41001 TACTCTTTCGTGTCATTTATATCAACGCAGTGCAGACATGGGTTTGGGTGTACCTTTGAA 41060
Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570
||| | |||||| || | || | ||||||||||| ||| | |||| |||||| |
Sbjct 41061 TATAACTAGTTATTGTCTATTGACTCAAATGATTGCACACGTTGCCAATTTCAAAACGTG 41120
Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630
||| || || |||| | |||||| | ||| ||||| | ||||| | ||| || ||
Sbjct 41121 TGAATTTGTGTACACGACTGGAGACACTCATGTTTACTTGAATCACGTCGAAGAGTTGAA 41180
Query 20631 ATTACAGT-TAACACGACA 20648
| | |||| ||| | ||||
Sbjct 41181 AATTCAGTGTAAGAGGACA 41199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398891858312305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |