Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq18227 84.2 4e-11 >seq18227 Length=276284 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 93571 TTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGGC 93630 ||||||||||| ||| ||| || | || | | | || ||||| || || || || Sbjct 241478 TTCACCACTTGAAATTCTCCAGACAACACTCTTCTTTGGTAAATGTTTGATGTAAATGGT 241419 Query 93631 TCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAACA 93690 ||||| |||||| ||| || || |||||||| || || ||||| ||||| ||||| | Sbjct 241418 TCAAATGATTCATTGTTTCCGAGAATCTGTGCTGTAGAAGCAGTTGGCATTGGAGCTAGC 241359 Query 93691 AACATTGAATTGTGAACACCATACTT 93716 || | ||||||| ||| |||| ||| Sbjct 241358 AAAAGTGAATTGCGAAGGCCATGCTT 241333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988822636026795