Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 499 4e-136
seq33365 125 9e-24
>seq18227
Length=276284
Score = 499 bits (552), Expect = 4e-136
Identities = 1205/1809 (67%), Gaps = 44/1809 (2%)
Strand=Plus/Minus
Query 64817 TTTTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAG 64876
||| ||||| ||||| | |||||| ||||| | || || ||||| || | ||
Sbjct 241839 TTTAATTTTGGATTTGTCAACTGTGAACTGAATAGCGTTGGCGGCAGGTTTGGTTCTTAA 241780
Query 64877 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 64936
|||||||||||| || || || || | |||| | || ||||| || ||||||||
Sbjct 241779 ATAGTACATTCCAGTCTTGAGCCCAATTTTCCAGGCATAGAAATGAATTGAAGTTAGTTT 241720
Query 64937 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 64996
||| | || ||||||| ||||||||| | ||||||||| || || || || |||||
Sbjct 241719 CCCGTAATTAGGTTCTGCTACATGGATATTGAAAGATTGACTCTGGTCAATAAATGCTCC 241660
Query 64997 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AA 65055
|| || |||||||||| || | ||||| | ||| ||||| | |||||| || ||
Sbjct 241659 TCTATCCGCAGCCATTTGAATAGTGGTCTTAACGGAAATCTCCCACACAGTTTTGTACAA 241600
Query 65056 CTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAA 65112
|| || ||| |||| || | ||| |||| || || || ||| | ||||
Sbjct 241599 ATCTCT-AATTTCTTGGGGTATATTTTCAATATTTTGGATAGAACCATTGTTATGAATAA 241541
Query 65113 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 65172
| |||||| || || || | ||| || | | || ||| | || || | |||
Sbjct 241540 TGACATTCTTCATGTCTTCGTCCCACAAGTCAGCTTGAGTCAAATCCCTGAGTAAATGAT 241481
Query 65173 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 65232
|||| || |||||||||||||||||||| ||||| | |||||| || ||| | |
Sbjct 241480 GATTCACCACTTGAAATTCTCCAGACAACACTCTTCTTTGGTAAATGTTTGATGTAAATG 241421
Query 65233 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 65292
|||| | || ||||| ||||| | ||| || || || || ||||| ||||| || || |
Sbjct 241420 GTTCAAATGATTCATTGTTTCCGAGAATCTGTGCTGTAGAAGCAGTTGGCATTGGAGCTA 241361
Query 65293 CCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATT 65350
||| | ||| | ||| || ||| | || ||||||||||| || | ||| ||
Sbjct 241360 GCAAAAGTGAATTGCGAAGGCC--ATGCTTTGCAATTTTATCTTTGAGCTCTGTCCAGTT 241303
Query 65351 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GT 65409
||||||||| | ||| ||| || ||||| | |||||| |
Sbjct 241302 CCAAAGATCTGTAGGTGTTTTGTTCCACATGTCGTATTGAAGTATACCTTGACTGGCTGG 241243
Query 65410 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 65469
|| |||| | || ||| |||| ||||| || || |||||||||||||| || || |
Sbjct 241242 ACT-TCCTTCGTAAGTACTGTATACACCTTCTTTTTCTGCTAGTTCACAACTTGCTTCCA 241184
Query 65470 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTA 65528
|| || || |||||||||||||| |||| | ||| | || | | |||| | ||
Sbjct 241183 GAGCTCCATAGTAAATGGTTTCGAATATCTGTTGATTCA-ATAATATCGCTTTCTCACTT 241125
Query 65529 TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 65588
||| | || | | || | ||| | ||| || | ||| |||||||||||||| |||
Sbjct 241124 TCATAGGGCAGTCTCATTAGGACAAATGTGTCGGCCAGTCCCTGAACACCAATACCAATA 241065
Query 65589 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 65648
|| || |||||| |||| || | | ||||||||| | ||||| | || | ||| |||
Sbjct 241064 GGCCTGTGTCTCATATTCGAATTCTTAGCTTCTGGTACTGGATAGAAGTTCACATCAATA 241005
Query 65649 ATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTT-GAGAAAATCAAA 65707
||||| || | |||| || ||||| | || || | ||| | |||| | ||
Sbjct 241004 ATTTTGTTTAAATTTTGTGTGATGACTTTTGATATTTCTTTTAATTTTGTGAAATTATAA 240945
Query 65708 --TCGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACC 65765
| || || |||||||||| ||||| || | || || | |||||| || || ||
Sbjct 240944 GTTTTGTCTTCGTTTACAAACATATTCAAAGCTATTGAAGCTAAATTACATACAGCCACT 240885
Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 65825
|||| || | |||| | || ||||| || ||||| || || || || ||||||
Sbjct 240884 TCATCTTCAGAAGTGTATTCAACAATTTCAGTACAGAGATTGCTGCATTTAATCGTTCCT 240825
Query 65826 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 65885
||||||| |||||| || || |||| || | || || || | ||| |||| || |||
Sbjct 240824 AAATTTTTTTGATTGCTTTTCCTGTTGCAGGAGTCTTTGTATAACATGTATGGTGTTCCA 240765
Query 65886 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-----CTT-TATTATA 65939
|| || | || | ||||||||| |||||||| | ||| |||| ||| | | | |
Sbjct 240764 GTCTCTACTTGGGCTTCTATAATAGCTTTCCATAATACTTGAGCACGAACTTGTCTAACA 240705
Query 65940 GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAA 65999
| || | |||| | |||| ||| | ||| || || ||||| ||||||||
Sbjct 240704 TAATTAT-TCTCCT-----TTTCATATTTTTCATATAAGGCCTCAAACTCTTCTCCCCA- 240652
Query 66000 ACATTGTC---CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 66056
|||| | ||| || || | || || |||||||| ||| | ||| | | |
Sbjct 240651 --GGTGTCAGTTAGTCCGGGGCAATTATGAGGGCACATCAAGCTCCAGTTTCCATTA-CT 240595
Query 66057 TTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
||| |||| |||||| || | |||||| ||||| | || ||| || || || | |
Sbjct 240594 TTCAACTCTTTTCATGAATAAATCAGGTATCCACAAGGCATAAAACAATTCCCTAGCACG 240535
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
| |||||| || || ||||||||||| ||||| || ||| | | ||||| ||||||
Sbjct 240534 AACTTCCTCTTTGCCAGTATTCTTTTTCAGATCCAGAAACTCAAATATATCCGCATGCCA 240475
Query 66176 CGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 66235
|||||| ||||||| || | | || |||| || |||||||| ||||| | |||||
Sbjct 240474 CGGTTCTAAGTATACTGCAAATGCACCTGGCCTCTTATTTCCTCCTTGATCGACATATCT 240415
Query 66236 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 66295
||| ||||||||||| ||||| | ||| || | | |||||| || |||||| || ||
Sbjct 240414 AGCTGTGTTATTATACACTCTGAGCATGGGTACTAGACCATTCGAAACACCATTTGTTCC 240355
Query 66296 GGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTG 66351
| ||| | || |||| | ||| ||| || | || || || || |
Sbjct 240354 AGCAATAGTTGTGCCTTTTGCTCTAAT----GCAATGGACATGCAATCCAATCCCACCAG 240299
Query 66352 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 66411
| ||| || || || || ||| | || | |||||||| || |||||||| || ||||
Sbjct 240298 CAGATTTTGATATCAAGGCACATTGCTTAAGAGTATCATATATTCCCTCTATGCTGTCAT 240239
Query 66412 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 66471
| ||||| | || ||| || || | ||| | ||| | || || |
Sbjct 240238 CTTTCATGGCTATTAAAAAGCATGATGATAATTGAGGTTTGGGAGTGGCAGCTGAGAAGA 240179
Query 66472 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 66531
|| || || || ||||| |||||||||| |||| ||| || || | |||||||
Sbjct 240178 GAGTTGGGCTGGCATGAGTAAAATATTTTTCAGACAGTAAATTATAAGTGTTGATAGCTG 240119
Query 66532 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 66591
|| |||||| ||| ||||| | || |||||||| | ||||||||| || || |
Sbjct 240118 CATCGATATCCTCCCCATGTATTCCAATTGAAACACGCATAAGCATGTGCTGTGGCCTCT 240059
Query 66592 CAACGATCT 66600
| | ||||
Sbjct 240058 CTGCTATCT 240050
>seq33365
Length=5281
Score = 125 bits (138), Expect = 9e-24
Identities = 165/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| |||| ||||||||| || || || | ||| ||||||||||| ||||| |
Sbjct 3539 CCTCATCTCGTGAAATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCT 3598
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| | ||| ||||| || ||||| ||||||||||| ||||| || || || ||||| |
Sbjct 3599 TCAACCAGAATATTGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATG 3658
Query 36300 CAATAAGTCTCTCTCCATAACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGG 36356
| | || | ||||||| || |||| || | ||||||| |||||||||| |
Sbjct 3659 CCACAATACGCTCTCCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTG 3718
Query 36357 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGT 36404
||||| | ||||| || |||| || || ||||||||||| | | |||
Sbjct 3719 CCTTCCTCTTTACGCATGGCAGAGTTTCAATAGCATTAAACAAAAAGT 3766
Score = 123 bits (136), Expect = 3e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477
|||| | | |||||| || ||||| | | |||||| || || |||| || || |||||
Sbjct 4383 ATCTCTGATATATGTGTCTATCAACAAAGAATACATCTCAGAGTGAACATTCTCCATGGC 4442
Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537
||||||||||| ||||||||||| || || || | || |||||| | || | ||
Sbjct 4443 AATTTGAAATCCATAGAAACATCTGGCTTCAGTGACTTGCACTTCTTGGGAGAACCTCTC 4502
Query 36538 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 36597
| | ||||||||| ||||| || ||| ||| ||||| || ||||| ||||| |||||
Sbjct 4503 CACAAGATTTTCATTGACTATCCCATCAGAGGCAGCAAAGAAGGCCAAGACATGCTTTAT 4562
Query 36598 AAAATATTTTTCG 36610
||||| |||||
Sbjct 4563 AAAATGCCTTTCG 4575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657678767269160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |