Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq33365 100 3e-16
>seq33365
Length=5281
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||| ||| | ||| || ||||| ||||| ||||| | || || || |
Sbjct 3539 CCTCATCTCGTGAAATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCT 3598
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| ||||| ||||||| ||||| || |||||||||||||||||||| || ||||| |
Sbjct 3599 TCAACCAGAATATTGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATG 3658
Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073
| | | || |||||||| | ||| | ||| | | ||||| | |||||| || |
Sbjct 3659 CCACAATACGCTCTCCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTG 3718
Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123
|| | || | | || ||||||||||||||||| ||| | |||
Sbjct 3719 CCTTCCTCTTTACGCATGGCAGAGTTTCAATAGCATTAAACAAAAAGTCC 3768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479367910166600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |