Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq6681 122 5e-23 >seq6681 Length=239609 Score = 122 bits (134), Expect = 5e-23 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || ||||| ||||||||||| |||||||| ||||| || || |||| ||| Sbjct 40088 GGTTTCTCTGTGGAGGGCCAAGAAAATATCCAAGAAATCTTATCAAAGCAGCTGTACTTG 40147 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 || |||||||| ||| ||||| || | ||| || || ||| ||| ||||||| Sbjct 40148 TGCCAATGTTTGGCAGCACTGATGCTCGTCAGAACCGGAGGAAATTTCGTTGTCAAATTG 40207 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTA 4068 |||||| ||||||| | || |||| |||| | || || |||||||| Sbjct 40208 TTCGATGTATTTACTCGATTCAGTGTTGGTCTCGTTTACTTGATGTA 40254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276351205025647