Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq56637 129 3e-25
seq50302 129 3e-25
seq52135 123 1e-23
seq52003 123 1e-23
seq39889 123 1e-23
seq39888 123 1e-23
seq14159 123 1e-23
seq50551 122 5e-23
seq1044 122 5e-23
seq51811 120 2e-22
seq37517 120 2e-22
seq30265 120 2e-22
seq29803 120 2e-22
seq27027 120 2e-22
seq49197 114 7e-21
>seq56637
Length=618539
Score = 129 bits (142), Expect = 3e-25
Identities = 84/92 (91%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 11441 AATAA--AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 34847 AATAAGTAAAAACAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 34788
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||| |||||||||||||||||||||
Sbjct 34787 ACGACGCTCTAACCAACTGAGCTAATGGGCCG 34756
>seq50302
Length=430035
Score = 129 bits (142), Expect = 3e-25
Identities = 84/93 (90%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497
||| | ||||||| | |||||||||||| |||||||||| ||||||||||||||||||
Sbjct 383966 ATTTAAAAAAAATTATATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 383907
Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||||||||| |||||||||||||||||||||
Sbjct 383906 CACGACGCTCTAACCAACTGAGCTAATGGGCCG 383874
>seq52135
Length=384484
Score = 123 bits (136), Expect = 1e-23
Identities = 81/90 (90%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| | | |||||||||| |||||||||| |||||||||||||||||||||
Sbjct 305478 AACAAAAAATAATAATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 305419
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||| |||||||||||||||||||||
Sbjct 305418 GACGCTCTAACCAACTGAGCTAATGGGCCG 305389
>seq52003
Length=33217
Score = 123 bits (136), Expect = 1e-23
Identities = 81/90 (90%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| |||||| | |||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 21960 AACAAAAAAGAATATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 22019
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||| |||||||||||||||||||||
Sbjct 22020 GACGCTCTAACCAACTGAGCTAATGGGCCG 22049
>seq39889
Length=2585
Score = 123 bits (136), Expect = 1e-23
Identities = 81/90 (90%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 2138 AACAAAAAATAATTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 2197
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||| |||||||||||||||||||||
Sbjct 2198 GACGCTCTAACCAACTGAGCTAATGGGCCG 2227
>seq39888
Length=3631
Score = 123 bits (136), Expect = 1e-23
Identities = 81/90 (90%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 2065 AACAAAAAATAATTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 2124
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||| |||||||||||||||||||||
Sbjct 2125 GACGCTCTAACCAACTGAGCTAATGGGCCG 2154
>seq14159
Length=244408
Score = 123 bits (136), Expect = 1e-23
Identities = 80/87 (92%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 11445 AAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 208731 AAAAATAAATATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 208790
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| |||||||||||||||||||||
Sbjct 208791 GCTCTAACCAACTGAGCTAATGGGCCG 208817
>seq50551
Length=277909
Score = 122 bits (134), Expect = 5e-23
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
|||||||||||| | | |||||||||| |||||||||| |||||||||||||||||
Sbjct 60548 AATTAATAAAAAGT-ATCGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 60490
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||| ||||||||||||||||||||
Sbjct 60489 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 60457
Score = 114 bits (126), Expect = 7e-21
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494
||| |||||||| ||| |||||||||| |||||||||| |||||||||||||||
Sbjct 57163 AATGAATAAAAAG---AATCGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 57107
Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||| ||||||||||||||||||||
Sbjct 57106 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 57072
>seq1044
Length=171551
Score = 122 bits (134), Expect = 5e-23
Identities = 78/86 (91%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| |||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 89997 AAAAATATTATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 90056
Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530
|||| |||||||||||||||||||||
Sbjct 90057 CTCTAACCAACTGAGCTAATGGGCCG 90082
>seq51811
Length=106051
Score = 120 bits (132), Expect = 2e-22
Identities = 82/92 (89%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||| | ||||| ||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 54921 TTATTTAAAAA--AAATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGC 54978
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||| |||||||||||||||||||||
Sbjct 54979 ACGACGCTCTAACCAACTGAGCTAATGGGCCG 55010
>seq37517
Length=9055
Score = 120 bits (132), Expect = 2e-22
Identities = 77/85 (91%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 6510 AAAATAATTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGC 6569
Query 11506 TCTRACCAACTGAGCTAATGGGCCG 11530
||| |||||||||||||||||||||
Sbjct 6570 TCTAACCAACTGAGCTAATGGGCCG 6594
>seq30265
Length=724830
Score = 120 bits (132), Expect = 2e-22
Identities = 80/90 (89%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
||||||| | | |||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 653920 ATAAAAAGTTATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 653861
Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
||||||| ||||||||||||||||||||||
Sbjct 653860 ACGCTCTAACCAACTGAGCTAATGGGCCGT 653831
Score = 116 bits (128), Expect = 2e-21
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 317818 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 317759
Query 11515 CTGAGCTAATGGGCCG 11530
||||||||||||||||
Sbjct 317758 CTGAGCTAATGGGCCG 317743
Score = 116 bits (128), Expect = 2e-21
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 324329 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 324270
Query 11515 CTGAGCTAATGGGCCG 11530
||||||||||||||||
Sbjct 324269 CTGAGCTAATGGGCCG 324254
Score = 114 bits (126), Expect = 7e-21
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 298421 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 298480
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 298481 TGAGCTAATGGGCCG 298495
Score = 114 bits (126), Expect = 7e-21
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 673025 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 672966
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 672965 TGAGCTAATGGGCCG 672951
Score = 91.5 bits (100), Expect = 8e-14
Identities = 74/90 (82%), Gaps = 10/90 (11%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 302877 AACAAAAAATTA--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 302820
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||| ||||||||||||||||
Sbjct 302819 GACGCT--------CTGAGCTAATGGGCCG 302798
Score = 86.0 bits (94), Expect = 3e-12
Identities = 73/90 (81%), Gaps = 10/90 (11%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| | ||||||||||| |||||||||| |||||||||| ||||||||||
Sbjct 311556 AACAAAAAATTA--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCATTATTAGCAC 311499
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||| ||||||||||||||||
Sbjct 311498 GACGCT--------CTGAGCTAATGGGCCG 311477
>seq29803
Length=353819
Score = 120 bits (132), Expect = 2e-22
Identities = 88/102 (86%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488
||| ||| ||||| |||||| | |||||||||| |||||||||| |||||||||
Sbjct 257876 AAAAATAAAATTATTAAAAAG-CTTTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 257818
Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||||||||||||| |||||||||||||||||||||
Sbjct 257817 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 257776
>seq27027
Length=331930
Score = 120 bits (132), Expect = 2e-22
Identities = 80/89 (90%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTG--GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||
Sbjct 197432 AAAAAATGTAATTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 197491
Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||||| |||||||||||||||||||||
Sbjct 197492 ACGCTCTAACCAACTGAGCTAATGGGCCG 197520
>seq49197
Length=5807
Score = 114 bits (126), Expect = 7e-21
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 5368 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5309
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 5308 TGAGCTAATGGGCCG 5294
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261299828400724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |