Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq34138 203 2e-48 >seq34138 Length=365 Score = 203 bits (224), Expect = 2e-48 Identities = 140/157 (89%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 316 TAATCTCTATTAAATTATCTTGACAATAGTATGCAAAATATCTTGAATCCGTGAACTAAC 375 ||||||| ||||||||||| ||||||||||||||||||||||||| ||| | ||||||| Sbjct 128 TAATCTCCGTTAAATTATCTCGACAATAGTATGCAAAATATCTTGATTCCTTTAACTAAC 187 Query 376 AAGACTATAATGATGAAAATAGTTGCCGAAATGAGGTGaaaaaaaTTTTTCGATCGTAAA 435 ||| ||||||| | |||||||||||| |||| ||| |||||||||||||||||||| || Sbjct 188 AAGGCTATAATACTAAAAATAGTTGCCAAAATAAGGCGAAAAAAATTTTTCGATCGT-AA 246 Query 436 GCACTCTCTGATGTTTCTCATCATGAGTCATGCAATA 472 ||||||||||||| ||| ||||||||||| ||||||| Sbjct 247 GCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27977886726764