Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_006660.1
Length=20197
Score E
Sequences producing significant alignments: (Bits) Value
seq17641 104 3e-18
seq55408 89.7 7e-14
>seq17641
Length=68962
Score = 104 bits (114), Expect = 3e-18
Identities = 103/130 (79%), Gaps = 5/130 (4%)
Strand=Plus/Minus
Query 9899 CGATATCTCTCGAACGAATCAACCGATTTT--GACCAGCTTGGTGGCAATCGACGTGGTT 9956
||||||||| ||| ||||||||||||||| |||| | ||| || ||||||| |||
Sbjct 191 CGATATCTCACGATCGAATCAACCGATTTCCGGACCGGACTGGCGGTGGTCGACGTCGTT 132
Query 9957 TTTTGATGTTAAGAGCTGATTAGTTTTTGGAATTGATCGGTAGAGCTATTTAAAAGTTA- 10015
||| | | ||| |||||||||||| ||||||| |||| ||||| | |||||||| ||
Sbjct 131 TTTA-AGGCTAAAAGCTGATTAGTTGTTGGAATCGATCAGTAGAACCATTTAAAAAATAT 73
Query 10016 -TTCCAAAAA 10024
|||||||||
Sbjct 72 TTTCCAAAAA 63
>seq55408
Length=12296
Score = 89.7 bits (98), Expect = 7e-14
Identities = 90/115 (78%), Gaps = 3/115 (3%)
Strand=Plus/Minus
Query 9905 CTCTCGAACGAATCAACCGATTTT--GACCAGCTTGGTGGCAATCGACGTGGTTTTTTGA 9962
||| ||| ||||||||||||||| |||| | ||| || ||||||| |||||| |
Sbjct 5914 CTCACGATCGAATCAACCGATTTCCGGACCGGACTGGCGGTGGTCGACGTCGTTTTTA-A 5856
Query 9963 TGTTAAGAGCTGATTAGTTTTTGGAATTGATCGGTAGAGCTATTTAAAAGTTATT 10017
| ||| |||||||||||| ||||||| |||| ||||| | |||||||| ||||
Sbjct 5855 GGCTAAAAGCTGATTAGTTGTTGGAATCGATCAGTAGAACCATTTAAAAAATATT 5801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 64467208249920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |