Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 504 9e-138
seq33365 122 1e-22
>seq18227
Length=276284
Score = 504 bits (558), Expect = 9e-138
Identities = 1204/1808 (67%), Gaps = 42/1808 (2%)
Strand=Plus/Minus
Query 61828 TTTTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAG 61887
||| ||||| ||||| | |||||| ||||| | || || ||||| || | ||
Sbjct 241839 TTTAATTTTGGATTTGTCAACTGTGAACTGAATAGCGTTGGCGGCAGGTTTGGTTCTTAA 241780
Query 61888 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 61947
|||||||||||| || || || || | |||| | || ||||| || ||||||||
Sbjct 241779 ATAGTACATTCCAGTCTTGAGCCCAATTTTCCAGGCATAGAAATGAATTGAAGTTAGTTT 241720
Query 61948 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62007
||| | || ||||||| ||||||||| | ||||||||| || || || || |||||
Sbjct 241719 CCCGTAATTAGGTTCTGCTACATGGATATTGAAAGATTGACTCTGGTCAATAAATGCTCC 241660
Query 62008 CCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AA 62066
|| || |||||||||| ||| | ||||| | ||| ||||| | |||||| || ||
Sbjct 241659 TCTATCCGCAGCCATTTGAATAGTGGTCTTAACGGAAATCTCCCACACAGTTTTGTACAA 241600
Query 62067 CTCGCTTAATATCTTCTGGAAGGTTT---GTATTCTGAATGGATCCACCATCTGCCATAA 62123
|| | |||| |||| || | ||| |||| || || || ||| | ||||
Sbjct 241599 ATCTC-TAATTTCTTGGGGTATATTTTCAATATTTTGGATAGAACCATTGTTATGAATAA 241541
Query 62124 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62183
| |||||| || || || | ||| || | | || ||| | || || | |||
Sbjct 241540 TGACATTCTTCATGTCTTCGTCCCACAAGTCAGCTTGAGTCAAATCCCTGAGTAAATGAT 241481
Query 62184 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62243
|||| || |||||||||||||||||||| ||||| | |||||| || ||| | |
Sbjct 241480 GATTCACCACTTGAAATTCTCCAGACAACACTCTTCTTTGGTAAATGTTTGATGTAAATG 241421
Query 62244 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62303
|||| | || ||||| ||||| | ||| || || || || ||||| ||||| || || |
Sbjct 241420 GTTCAAATGATTCATTGTTTCCGAGAATCTGTGCTGTAGAAGCAGTTGGCATTGGAGCTA 241361
Query 62304 CCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATT 62361
||| | ||| | ||| || ||| | || ||||||||||| || | ||| ||
Sbjct 241360 GCAAAAGTGAATTGCGAAGGCC--ATGCTTTGCAATTTTATCTTTGAGCTCTGTCCAGTT 241303
Query 62362 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GT 62420
||||||||| | ||| ||| || ||||| | |||||| |
Sbjct 241302 CCAAAGATCTGTAGGTGTTTTGTTCCACATGTCGTATTGAAGTATACCTTGACTGGCTGG 241243
Query 62421 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 62480
|| |||| | || ||| |||| ||||| || || |||||||||||||| || || |
Sbjct 241242 AC-TTCCTTCGTAAGTACTGTATACACCTTCTTTTTCTGCTAGTTCACAACTTGCTTCCA 241184
Query 62481 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTAT 62540
|| || || |||||||||||||| |||| | ||| | | ||||| | || |
Sbjct 241183 GAGCTCCATAGTAAATGGTTTCGAATATCTGTTGATTCAATAATATCGCTTTCTCACTTT 241124
Query 62541 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 62600
|| | || | | || | ||| | ||| || | ||| |||||||||||||| ||||
Sbjct 241123 CATAGGGCAGTCTCATTAGGACAAATGTGTCGGCCAGTCCCTGAACACCAATACCAATAG 241064
Query 62601 GTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 62660
| || |||||| |||| || | | ||||||||| | ||||| | || | ||| ||||
Sbjct 241063 GCCTGTGTCTCATATTCGAATTCTTAGCTTCTGGTACTGGATAGAAGTTCACATCAATAA 241004
Query 62661 TTTTATTGAGATTTCTGACAATTACTTTGACCACATC-CTTCAGTTTGAGAAA--ATCAA 62717
|||| || | |||| || ||||| | || || | |||| |||| || |
Sbjct 241003 TTTTGTTTAAATTTTGTGTGATGACTTTTGATATTTCTTTTAATTTTGTGAAATTATAAG 240944
Query 62718 ATCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 62777
| | || |||||||||| ||||| || | || || | |||||| || || || |
Sbjct 240943 TTTTGTCTTCGTTTACAAACATATTCAAAGCTATTGAAGCTAAATTACATACAGCCACTT 240884
Query 62778 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 62837
||| || | |||| | || ||||| || ||||| || || || || |||||||
Sbjct 240883 CATCTTCAGAAGTGTATTCAACAATTTCAGTACAGAGATTGCTGCATTTAATCGTTCCTA 240824
Query 62838 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 62897
|||||| |||||| || || |||| || | || || || | ||| |||| || ||||
Sbjct 240823 AATTTTTTTGATTGCTTTTCCTGTTGCAGGAGTCTTTGTATAACATGTATGGTGTTCCAG 240764
Query 62898 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-----CTT-TATTATAG 62951
| || | || | ||||||||| |||||||| | ||| |||| ||| | | | |
Sbjct 240763 TCTCTACTTGGGCTTCTATAATAGCTTTCCATAATACTTGAGCACGAACTTGTCTAACAT 240704
Query 62952 ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 63011
| || | |||| | |||| ||| | ||| || || ||||| ||||||||
Sbjct 240703 AATTAT-TCTCCT-----TTTCATATTTTTCATATAAGGCCTCAAACTCTTCTCCCCA-- 240652
Query 63012 CATTGTC---CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 63068
|||| ||||| || || | || || |||||||| ||| | ||| | | | |
Sbjct 240651 -GGTGTCAGTTAGTCCGGGGCAATTATGAGGGCACATCAAGCTCCAGTTTCCATTA-CTT 240594
Query 63069 TC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63127
|| |||| |||||| || | |||||| ||||| | || ||| | || || | | |
Sbjct 240593 TCAACTCTTTTCATGAATAAATCAGGTATCCACAAGGCATAAAACAATTCCCTAGCACGA 240534
Query 63128 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63187
|||||| || || ||||||||||| ||||| || ||| | | ||||| | |||||||
Sbjct 240533 ACTTCCTCTTTGCCAGTATTCTTTTTCAGATCCAGAAACTCAAATATATCCGCATGCCAC 240474
Query 63188 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63247
||||| ||||||| || | | || |||| || |||||||| ||||| | ||||||
Sbjct 240473 GGTTCTAAGTATACTGCAAATGCACCTGGCCTCTTATTTCCTCCTTGATCGACATATCTA 240414
Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307
|| ||||||||||| ||||| | ||| || | | |||||| || |||||| || ||
Sbjct 240413 GCTGTGTTATTATACACTCTGAGCATGGGTACTAGACCATTCGAAACACCATTTGTTCCA 240354
Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGC 63363
| ||| | || | || | ||| ||| || | || || || || ||
Sbjct 240353 GCAATAGTTGTGCCTTTTGCTCTAAT----GCAATGGACATGCAATCCAATCCCACCAGC 240298
Query 63364 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 63423
||| || || || || ||| | || | |||||||| || |||||||| || |||||
Sbjct 240297 AGATTTTGATATCAAGGCACATTGCTTAAGAGTATCATATATTCCCTCTATGCTGTCATC 240238
Query 63424 CATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 63483
||||| | || ||| || || | ||| | ||| | || || |
Sbjct 240237 TTTCATGGCTATTAAAAAGCATGATGATAATTGAGGTTTGGGAGTGGCAGCTGAGAAGAG 240178
Query 63484 GGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGA 63543
|| || || |||||||| |||||||||| |||| ||| || || | |||||||
Sbjct 240177 AGTTGGGCTGGCATGAGTAAAATATTTTTCAGACAGTAAATTATAAGTGTTGATAGCTGC 240118
Query 63544 GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63603
|| |||||| ||| ||||| | || |||||||| | ||||||||| || || ||
Sbjct 240117 ATCGATATCCTCCCCATGTATTCCAATTGAAACACGCATAAGCATGTGCTGTGGCCTCTC 240058
Query 63604 AACGATCT 63611
| ||||
Sbjct 240057 TGCTATCT 240050
>seq33365
Length=5281
Score = 122 bits (134), Expect = 1e-22
Identities = 164/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| |||| ||||||||| || || || | ||| ||||||||||| ||||| |
Sbjct 3539 CCTCATCTCGTGAAATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCT 3598
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| | ||| ||||| || ||||| ||||||||||| ||||| || || || ||||| |
Sbjct 3599 TCAACCAGAATATTGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATG 3658
Query 32803 CAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGG 32859
| | || | ||||||| || || | || | ||||||| |||||||||| |
Sbjct 3659 CCACAATACGCTCTCCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTG 3718
Query 32860 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGT 32907
||||| | ||||| || |||| || || ||||||||||| | | |||
Sbjct 3719 CCTTCCTCTTTACGCATGGCAGAGTTTCAATAGCATTAAACAAAAAGT 3766
Score = 118 bits (130), Expect = 1e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980
|||| | | |||||| || ||||| | | |||||| || || |||| || || |||||
Sbjct 4383 ATCTCTGATATATGTGTCTATCAACAAAGAATACATCTCAGAGTGAACATTCTCCATGGC 4442
Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040
||||||||||| ||||| ||||| || || || | || |||||| | || | ||
Sbjct 4443 AATTTGAAATCCATAGAAACATCTGGCTTCAGTGACTTGCACTTCTTGGGAGAACCTCTC 4502
Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100
| | ||||||||| ||||| || ||| ||| ||||| || ||||| ||||| |||||
Sbjct 4503 CACAAGATTTTCATTGACTATCCCATCAGAGGCAGCAAAGAAGGCCAAGACATGCTTTAT 4562
Query 33101 AAAATATTTTTCG 33113
||||| |||||
Sbjct 4563 AAAATGCCTTTCG 4575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633156387900400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |