Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq49719 412 4e-110
>seq49719
Length=92225
Score = 412 bits (456), Expect = 4e-110
Identities = 821/1203 (68%), Gaps = 21/1203 (2%)
Strand=Plus/Minus
Query 51245 GTCGCCCAGGCCCTCGTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCA 51304
|| |||||| ||| || ||||||||||| ||||| |||||||| |||||||| |||||
Sbjct 81180 GTTGCCCAGACCCATGTTCATGGCGTTCAAGAGGTCACCGTTGTCGGCGTCGATCTCCCA 81121
Query 51305 CGCAAACAATCCCGCCAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACGGATCG 51364
||| |||| || ||||| ||| |||||| | |||||| || ||||||||
Sbjct 81120 CGCGAACAGACCTCCCAACTTGTTGTTCCTCACGTATTTGCCCTTCTCGATAACGGATCT 81061
Query 51365 AGCGTTGTCGAACGTGATCAGGTTGCCCGCGATCGGTTC-GAAGCCGTACGCAGCCTCGG 51423
| ||| ||| | ||||| |||| |||| | | | | ||| |||| | ||||| |
Sbjct 81060 TGGGTTATCGTAAGTGATGAGGTC-CCCGGTAGCCTTCCTGAACACGTATGGAGCCTGCG 81002
Query 51424 CGATCAGATCGTAGTAGAACTCGTAGT---CTTTGACGAACTCGTTCGCGATCTGCCGAT 51480
| | ||| || | |||||| | | | | | | | |||| || |||| | |
Sbjct 81001 CCACGTTATCATAATGGAACTCCCACTTACCCTGGGCTATTTCGTCGGCAATCTCTCTGT 80942
Query 51481 AGTCGACCACCCCATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACC 51540
|||| || || || | | |||||| || | || |||||| ||||||||| ||||
Sbjct 80941 AGTCCACGACACCGTCCTGCCAGGTTCCCTTGACTGGTCCGGTCGCGACGCCGGTGAAGG 80882
Query 51541 AGTTCGGTTCGTAGTCGTAG--CCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCAC 51598
||| ||| || |||| | || | | | |||||| ||| ||||||| |||||
Sbjct 80881 GGTT--GTTGTCTGT-GTAGTTCTGGACTCCG--GTCCAGCCACGACCGTACATGGCCAC 80827
Query 51599 GCCGACGACGATCTTCTGATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTC 51658
||||| | |||||||| | | ||| ||||| |||| || | || | | ||
Sbjct 80826 TCCGACAATGATCTTCTTAGGGTTCACTCCCTGAGCGAGCAGGTATTGGACTCCGAAATC 80767
Query 51659 GGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAG 51718
| ||||| | || | ||| |||| || ||| |||||| ||| |||| || ||
Sbjct 80766 TGATGTGTAAGTCTCCTTGGGCCTCCACGCTGGAGCGTACAGTGGGGTTTGGTGACCGAG 80707
Query 51719 ATCGGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTG 51778
| ||||||||| || |||||||| |||||| |||| ||||| |||| |||| |
Sbjct 80706 GGTGTCGTTGGACCAGGCTCCCTTGAAGTCGTAGCTCATCAGGAAGATGTGGTCCATGTA 80647
Query 51779 CGTCTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCT 51838
|||||||| |||||||| || || || || || | || || || || |||
Sbjct 80646 GTTCTGCGCCTTGTTGTAGTCGATTACCTGGATCTTGTCCCATCCAGCACTAATAGCGGA 80587
Query 51839 GGTCAACAGGTACGAACGGTTC--GTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGC 51896
|||| | ||| | ||| || |||||| || |||| ||||| || || |||
Sbjct 80586 TGTCAGCTCGTATTTCC--TTCCGGTCTCGGCGCCCAGTTCGTTCAGCATTTCACGAAGC 80529
Query 51897 TCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGATTG 51956
|| ||| || || |||||| | || || | || | || |||| || |||
Sbjct 80528 TCTTTCATCAGTGTGACGTACACTTCGCCGTCTTTA---GGGCCACCGAGGTGAGGGTTG 80472
Query 51957 GCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTC 52016
|| ||||| || || || |||||||| |||| || || ||||||||||||||||| |||
Sbjct 80471 GCACCTTTACCACCAGGGAACTCCCAATCGATATCAACACCGTCGAAGAACTTCCATGTC 80412
Query 52017 AGCAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGTCGTGCAGGAAG 52076
|||| || || || || |||| ||| | | ||| | || | | ||||
Sbjct 80411 TGCAGGAAGTCTTTTACTGAAGCGACAAAGCGATCTCTTTTAACCTTATCATCAAAGAAG 80352
Query 52077 AAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTG 52136
||||||||||||| | ||||| || |||| || ||||||||||| | || ||
Sbjct 80351 AAGAACGGATCGGCTAAGGTCCAGCCACCGACGGAAGGCAGAATCTTTAAGTCGGGCCTG 80292
Query 52137 GCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAG 52196
||| |||| | ||||||||| |||||||| |||||||| || || ||||| ||
Sbjct 80291 GCCTGTTTTAGAGACATCAGCTGACCAAAGTTACCCTTGTAAGGTTCATTCCAACTAGAC 80232
Query 52197 ACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCC 52256
| || ||||| || |||||||| || ||||| || || ||||| | |||||| ||||||
Sbjct 80231 AGACCCTTCTGTGGCTTCTGCAGGGCTGCCCATGGGTCATGAATAGACACCTTGAAGTCC 80172
Query 52257 GACCTGCCCAC-GCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCT 52315
| | |||| ||| |||||||||||||| | || || ||||| |||| ||
Sbjct 80171 TCGC-GACCACTGCAAGACCGTTGCAACGCGGCAAAGCTTCCATCGATTTCCTTCAAACT 80113
Query 52316 GTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTT 52375
||||||||| || || || || || || |||||||| |||||||| ||||| ||||||||
Sbjct 80112 GTCGTTGATACCATCACCACCACAAATAGGAATGAAACCGTACAGAAGATGAGACAGGTT 80053
Query 52376 CGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTA 52435
|||| || | | ||| || || || || | | || || ||||| ||||| |||||
Sbjct 80052 GGGCACTGGAATCTTATCAACTGGGAATTTCCTCGGATAGACTCCCCACTCGACGAAGTA 79993
Query 52436 GGC 52438
||
Sbjct 79992 TGC 79990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537199668318040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |