Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq40325 95.1 2e-14
seq28254 93.3 9e-14
seq55291 91.5 3e-13
seq54393 91.5 3e-13
seq46541 91.5 3e-13
seq44741 91.5 3e-13
seq42537 91.5 3e-13
seq40256 91.5 3e-13
seq10802 91.5 3e-13
seq3746 91.5 3e-13
seq2168 91.5 3e-13
seq1082 91.5 3e-13
seq1044 91.5 3e-13
seq52952 89.7 1e-12
seq48365 89.7 1e-12
seq38195 89.7 1e-12
seq8404 89.7 1e-12
seq7406 89.7 1e-12
>seq40325
Length=136505
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 112751 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 112810
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 112811 AGCCCCACGTTGGGC 112825
>seq28254
Length=66876
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 25623 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 25682
Query 142563 CCCCACATCGGGCAGA 142578
|||||| | |||| ||
Sbjct 25683 CCCCACGTTGGGCGGA 25698
>seq55291
Length=35915
Score = 91.5 bits (100), Expect = 3e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 142047 ACGCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|| || ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||
Sbjct 13584 ACACAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGT 13525
Query 142107 TCGACCCCCGCCAGAGACGC 142126
|||| |||| |||| || ||
Sbjct 13524 TCGATCCCCACCAGGGATGC 13505
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109
|||||| ||| |||||| ||||||||||||||||||||||||||||||| | |||||||
Sbjct 12584 CATGTCCCTGAGGCGCAGAGGACAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 12643
Query 142110 ACCCCCGCCAGAGACGC 142126
| || | |||| || ||
Sbjct 12644 ATCCTCACCAGGGATGC 12660
>seq54393
Length=699020
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 583252 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 583193
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 583192 CCCCACGTTGGGC 583180
>seq46541
Length=55064
Score = 91.5 bits (100), Expect = 3e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 142047 ACGCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|| || ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||
Sbjct 62 ACACAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGT 121
Query 142107 TCGACCCCCGCCAGAGACGC 142126
|||| |||| |||| || ||
Sbjct 122 TCGATCCCCACCAGGGATGC 141
>seq44741
Length=772673
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 224872 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 224813
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 224812 CCCCACGTTGGGC 224800
>seq42537
Length=316581
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 206093 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 206034
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 206033 CCCCACGTTGGGC 206021
>seq40256
Length=2834
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1695 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1754
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1755 CCCCACGTTGGGC 1767
>seq10802
Length=1383834
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 883735 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 883794
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 883795 CCCCACGTTGGGC 883807
>seq3746
Length=904159
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 720017 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 719958
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 719957 CCCCACGTTGGGC 719945
>seq2168
Length=53018
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 21167 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 21108
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 21107 CCCCACGTTGGGC 21095
>seq1082
Length=161329
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 53908 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 53849
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 53848 CCCCACGTTGGGC 53836
>seq1044
Length=171551
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 8362 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8421
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 8422 CCCCACGTTGGGC 8434
>seq52952
Length=179667
Score = 89.7 bits (98), Expect = 1e-12
Identities = 74/88 (84%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 142039 GGCAT-TAAACGCAT--GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAA 142095
||||| | |||||| ||| |||||||||| ||| |||||||||||||||||||||||
Sbjct 158204 GGCATGTCAACGCAACAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAA 158145
Query 142096 AGGTTGCGGGTTCGACCCCCGCCAGAGA 142123
|||| | |||||||| |||| |||| ||
Sbjct 158144 AGGTCGTGGGTTCGATCCCCACCAGGGA 158117
>seq48365
Length=162453
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 146355 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 146414
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 146415 CCCACGTTGGGC 146426
>seq38195
Length=828330
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 502683 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 502742
Query 142113 CCCGCCAGAGACGCCAG 142129
||| |||| || || ||
Sbjct 502743 CCCACCAGGGATGCAAG 502759
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 509992 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 510051
Query 142113 CCCGCCAGAGACGCCAG 142129
||| |||| || || ||
Sbjct 510052 CCCACCAGGGATGCAAG 510068
>seq8404
Length=1966717
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 408603 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 408662
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 408663 CCCACGTTGGGC 408674
>seq7406
Length=427096
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 8019 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7960
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 7959 CCCACGTTGGGC 7948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027046005171209
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |