Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_008689.1
Length=44857
Score E
Sequences producing significant alignments: (Bits) Value
seq11956 176 1e-39
>seq11956
Length=1081
Score = 176 bits (194), Expect = 1e-39
Identities = 225/305 (74%), Gaps = 4/305 (1%)
Strand=Plus/Plus
Query 40987 AGAAAAAGTAAATATGAAGAACAAAAATCGATTCTTA-AAGATAGAAATAGCTTTTCTAA 41045
|||||| |||||||||| | || ||||| || |||| |||| |||||||||||
Sbjct 771 AGAAAACAAAAATATGAAGCTTACAAC-CGATTGTTTCAAGAACGAAACAGCTTTTCTAA 829
Query 41046 AACTGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACT 41105
||| ||| ||||| ||||||||| ||||||| || ||| | ||| ||||| || |
Sbjct 830 AACAGATACAGATGCCACTTTTATGCGAATGAAAGACGACTACATGCGCAATGGTCAGTT 889
Query 41106 TAAGCCAGGATACAATTTACAAATAGCGACAAATTCTCAATTTGTTTTATCCTATGACCT 41165
|||||||| |||||||||||||| || ||| | ||| | ||| || | ||||| ||
Sbjct 890 AAAGCCAGGCTACAATTTACAAATCGCAACAGAAAATCAGTATGTCTTGGCTTATGATCT 949
Query 41166 ATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTA-ACAATGATTCAAAATA 41224
||| | ||| || ||||| || | ||| |||| ||| || ||| ||| || | | |
Sbjct 950 ATTCCCAAATCCAACAGACACAAAAACCTTAAATCCGTTCTTAGACAGCTTTTTAGAGCA 1009
Query 41225 CCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACT 41284
| | | | ||||| || |||||||| |||||||| |||||||||||||| |||| |
Sbjct 1010 AC-ACAATGAATTACCTGAATATATTGTGGCTGATGCCGGTTATGGTAGTGAAGAAAATT 1068
Query 41285 ATATG 41289
|||||
Sbjct 1069 ATATG 1073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143318529227022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |