Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq33365 84.2 4e-11 >seq33365 Length=5281 Score = 84.2 bits (92), Expect = 4e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||||||||| || |||||||| || ||||||||||| || || | |||||| Sbjct 4549 TGGCCTTCTTTGCTGCCTCTGATGGGATAGTCAATGAAAATCTTGTGGAGAGGTTCTCCC 4490 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 |||| ||||| | ||| || | || ||||| || || || || ||||| ||||| | Sbjct 4489 AAGAAGTGCAAGTCACTGAAGCCAGATGTTTCTATGGATTTCAAATTGCCATGGAGAATG 4430 Query 42544 TGCACTCTGAGGTGTA 42559 | ||||||||| |||| Sbjct 4429 TTCACTCTGAGATGTA 4414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943630367192240