Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq21645 143 2e-29 >seq21645 Length=48146 Score = 143 bits (158), Expect = 2e-29 Identities = 86/89 (97%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 115539 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 115597 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 36071 GCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 36012 Query 115598 ATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||||||||||||||| ||||||| ||||| Sbjct 36011 ATATTGAGCCATTCGCGGTATCGCCTTAA 35983 Score = 143 bits (158), Expect = 2e-29 Identities = 86/89 (97%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 114342 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 114400 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 36071 GCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 36012 Query 114401 ATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||||||||||||||| ||||||| ||||| Sbjct 36011 ATATTGAGCCATTCGCGGTATCGCCTTAA 35983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396771810999298