Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 100 3e-16
>seq18227
Length=276284
Score = 100 bits (110), Expect = 3e-16
Identities = 245/368 (67%), Gaps = 5/368 (1%)
Strand=Plus/Minus
Query 116248 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 116307
|| || || || || ||||| | ||||| || | ||||||||||| || || |||
Sbjct 241094 TCGGCCAGTCCCTGAACACCAATACCAATAGGCCTGTGTCTCATATTCGAATTCTTAGC- 241036
Query 116308 GTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 116366
||| || ||||| || ||| ||| |||| | |||| ||||| |||| || ||
Sbjct 241035 TTCTGGTACTGGATAGAAGTTCACATCAATAATTTTGTTTAAATTTTGTGTGATGACTTT 240976
Query 116367 TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG 116426
|| ||||| | | ||| | ||| | || | | ||||| || ||| || ||
Sbjct 240975 TGATATTTCTTTTAATTTTGTGAAATTATAAGT---TTTGTCTTCGTTTACAAACATATT 240919
Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486
| || ||||| || | |||||| |||| ||||| | | |||||| || | |||
Sbjct 240918 CAAAGCTATTGAAGCTAAATTACATACAGCCACTTCATCTTCAGAAGTGTATTCAACAAT 240859
Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546
||| ||||| | ||| | ||||| || || || || |||||||| || ||||
Sbjct 240858 TTCAGTACAGAGATTGCTGCATTTAATCGTTCCTAAATTTTTTTGATTGCTTTTCCTGTT 240799
Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606
|| | || ||||| | ||| ||||| || || ||||| ||||| | | ||||||
Sbjct 240798 GCAGGAGTCTTTGTATAACATGTATGGTGTTCCAGTCTCTACTTGGGCTTCTATAATAGC 240739
Query 116607 CTTCCATA 116614
|||||||
Sbjct 240738 TTTCCATA 240731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613046693826840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |