Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq18227 120 4e-22 >seq18227 Length=276284 Score = 120 bits (132), Expect = 4e-22 Identities = 249/366 (68%), Gaps = 5/366 (1%) Strand=Plus/Plus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 |||||||||||| | | | ||| |||||||| |||||||| ||| | ||||||||| Sbjct 240733 TGGAAAGCTATTATAGAAGCCCAAGTAGAGACTGGAACACCATACATGTTATACAAAGAC 240792 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 |||| ||| || || |||||||| ||||| || ||| || | ||| |||||| Sbjct 240793 TCCTGCAACAGGAAAAGCAATCAAAAAAATTTAGGAACGATTAAATGCAGCAATCTCTGT 240852 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 || ||||| | |||| || ||||||| |||||| ||||| | || ||||| Sbjct 240853 ACTGAAATTGTTGAATACACTTCTGAAGATGAAGTGGCTGTATGTAATTTAGCTTCAATA 240912 Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 112517 ||| | | || ||| | | ||||||| || | | ||| |||| | | ||| Sbjct 240913 GCTTTGAATATGTTTGT--AAACGAAGACAAA-ACTTATAATTTCACAAAATTAAAAGAA 240969 Query 112518 GTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 112576 | | ||| ||||| |||| |||||| | |||||||| || || || || || Sbjct 240970 ATATCAAAAGTCATCACACAAAATTTAAACAAAATTATTGATGTGAACTTCTATCCAGTA 241029 Query 112577 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCT 112636 ||| ||| || || |||||||||||| | || |||||| | ||||| || || || Sbjct 241030 CCAGA-AGCTAAGAATTCGAATATGAGACACAGGCCTATTGGTATTGGTGTTCAGGGACT 241088 Query 112637 CGCGGA 112642 || || Sbjct 241089 GGCCGA 241094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620276462995280