Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 120 4e-22
>seq18227
Length=276284
Score = 120 bits (132), Expect = 4e-22
Identities = 249/366 (68%), Gaps = 5/366 (1%)
Strand=Plus/Plus
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
|||||||||||| | | | ||| |||||||| |||||||| ||| | |||||||||
Sbjct 240733 TGGAAAGCTATTATAGAAGCCCAAGTAGAGACTGGAACACCATACATGTTATACAAAGAC 240792
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|||| ||| || || |||||||| ||||| || ||| || | ||| ||||||
Sbjct 240793 TCCTGCAACAGGAAAAGCAATCAAAAAAATTTAGGAACGATTAAATGCAGCAATCTCTGT 240852
Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457
|| ||||| | |||| || ||||||| |||||| ||||| | || |||||
Sbjct 240853 ACTGAAATTGTTGAATACACTTCTGAAGATGAAGTGGCTGTATGTAATTTAGCTTCAATA 240912
Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 112517
||| | | || ||| | | ||||||| || | | ||| |||| | | |||
Sbjct 240913 GCTTTGAATATGTTTGT--AAACGAAGACAAA-ACTTATAATTTCACAAAATTAAAAGAA 240969
Query 112518 GTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 112576
| | ||| ||||| |||| |||||| | |||||||| || || || || ||
Sbjct 240970 ATATCAAAAGTCATCACACAAAATTTAAACAAAATTATTGATGTGAACTTCTATCCAGTA 241029
Query 112577 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCT 112636
||| ||| || || |||||||||||| | || |||||| | ||||| || || ||
Sbjct 241030 CCAGA-AGCTAAGAATTCGAATATGAGACACAGGCCTATTGGTATTGGTGTTCAGGGACT 241088
Query 112637 CGCGGA 112642
|| ||
Sbjct 241089 GGCCGA 241094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620276462995280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |