Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq33365 84.2 3e-11 >seq33365 Length=5281 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/205 (69%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||| || || || | ||||||||||| | ||||||||| || || | ||||| Sbjct 3541 TCATCTCGTGAAATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCTTC 3600 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 | ||| || || | |||||| ||||||||||| || ||||| ||| || || || Sbjct 3601 AACCAGAATATTGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATGCC 3660 Query 119637 AATAGACGCTCAGCAAAAGGTCGAGACTTG---TCGAACCACTTGAGAGCCCAGTTGGCC 119693 | | |||||| |||||| | | |||| | | ||||| |||||||| | ||| Sbjct 3661 ACAATACGCTCTCCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTGCC 3720 Query 119694 TTACGCTCTATGCAGGGGACAGTTT 119718 || | || || ||| || | ||||| Sbjct 3721 TTCCTCTTTACGCATGGCAGAGTTT 3745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588533907252200