Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq49719 300 1e-76 seq42682 116 2e-21 seq17913 102 5e-17 >seq49719 Length=92225 Score = 300 bits (332), Expect = 1e-76 Identities = 832/1254 (66%), Gaps = 60/1254 (5%) Strand=Plus/Minus Query 5341 GTTGCCCAGACCTCGATTCATGGCATTCAGAAGGTCTCCGTTGTCGGCGTCGATCTCCCA 5400 |||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||| Sbjct 81180 GTTGCCCAGACCCATGTTCATGGCGTTCAAGAGGTCACCGTTGTCGGCGTCGATCTCCCA 81121 Query 5401 CGCAAACAATCCACCCAGACTATTCTGCAGTACGTACTTAGCCTTAGCTTCGAT---GGA 5457 ||| |||| || |||| | || | | ||||| || |||| ||||| ||| Sbjct 81120 CGCGAACAGACCTCCCAACTTGTTGTTCCTCACGTATTTGCCCTTC---TCGATAACGGA 81064 Query 5458 TCGATGGTCGTCGTAACTGACGACGTCGACTCCAACCTTACCGTCTCGGTACGCAAAAGA 5517 || ||| |||||| ||| || ||| | | |||| | | ||| | | Sbjct 81063 TCTTGGGTTATCGTAAGTGATGAGGTCCCCGGTAGCCTTCCTGAACACGTATGGA----- 81009 Query 5518 CGCGTCGGCGACAAAGTCATACTCGAACTTGTAATCGACC-GAAC--------CGGCTAT 5568 || | || || ||||| | ||||| | | || | | |||| || Sbjct 81008 -GCCTGCGCCACGTTATCATAATGGAACTCCCACTTACCCTGGGCTATTTCGTCGGCAAT 80950 Query 5569 GTTTCTATAATCCACCACACCGTTTTCCCAGGTGCCGGCAATCTTGTC-GGTCGCCACAC 5627 | ||| || ||||| ||||||| | |||||| || | || ||| |||||| || | Sbjct 80949 CTCTCTGTAGTCCACGACACCGTCCTGCCAGGTTCCCTTGA-CTGGTCCGGTCGCGACGC 80891 Query 5628 CGGTAAATACATTATTGTTCACCTGGTCGTGCACTCCGGACCACCCACGACCGTACATGG 5687 |||| || || |||| | || || ||||||| ||| |||||||||||||||| Sbjct 80890 CGGTGAAGGGGTTGTTGTCTGTGTAGTTCTGGACTCCGGTCCAGCCACGACCGTACATGG 80831 Query 5688 CTACACCCACAATTAGCTTCTTCGATTCGACGCTCTGATTTAACAGACGCTTGATTGAAA 5747 | || || ||||| | |||||| | | || | |||| | ||| | || | | Sbjct 80830 CCACTCCGACAATGATCTTCTTAGGGTTCACTCCCTGAGCGAGCAGGTATTGGACTCCGA 80771 Query 5748 AATCTGTCGTGTATGTCTCGCCTGGG-TTCCACGATGGAGCGTACAGAGGTGTCTGGTGT 5806 |||||| ||||| ||||| | |||| |||||| |||||||||||| || || ||||| Sbjct 80770 AATCTGATGTGTAAGTCTC-CTTGGGCCTCCACGCTGGAGCGTACAGTGGGGTTTGGTGA 80712 Query 5807 CCCA--GATCCGTTAACGACCAGGCACCCTTGTAGTCGTACGTCATAACAAAGATGTGAT 5864 || | | |||| |||||||| |||||| ||||||| |||| | |||||||| | Sbjct 80711 CCGAGGGTGTCGTT--GGACCAGGCTCCCTTGAAGTCGTAGCTCATCAGGAAGATGTGGT 80654 Query 5865 CAAGATACCTTTGTGCGCTGGCGTAGTCGACAACGTCGATCTTGTCATGTCCCGCGCCGA 5924 | | || | || || || |||||||| || | ||||||||| ||| || | | Sbjct 80653 CCATGTAGTTCTGCGCCTTGTTGTAGTCGATTACCTGGATCTTGTCCCATCCAGCACTAA 80594 Query 5925 TAGCACTTGTCA-ATTGTAACCGTTTAC-CCCG--CTTCTCGCCCAACTCGTCAAGCATC 5980 |||| ||||| | ||| ||| | ||| || |||||| |||| ||||| Sbjct 80593 TAGCGGATGTCAGCTCGTA----TTTCCTTCCGGTCTCGGCGCCCAGTTCGTTCAGCATT 80538 Query 5981 ACGCGAAGTTCCCGCAACAAAAGAGTGTACGTA----TTGCGGTCCACCTCGGCATTACC 6036 | ||||| || || | || ||| ||||| | || || | | | ||| Sbjct 80537 TCACGAAGCTCTTTCATC---AGTGTG-ACGTACACTTCGCCGT---CTTTAGGGCCACC 80485 Query 6037 CAACACAGGATTAGCACCCTTTCCACCCGGAAACTCCCAGTCAATGTCCACTCCGTCAAA 6096 | ||| || ||||| || ||||| || |||||||| || || || || ||||| || Sbjct 80484 GAGGTGAGGGTTGGCACCTTTACCACCAGGGAACTCCCAATCGATATCAACACCGTCGAA 80425 Query 6097 GAACTTCCATGTCTCCAGAAACTCGCGGACACTTGTGACGAACACCTTACGTTTGGAGTC 6156 |||||||||||||| ||| || || || | ||| || | | ||| | Sbjct 80424 GAACTTCCATGTCTGCAGGAAGTCTTTTACTGAAGCGACAAAGCGATCTCTTTTAACCTT 80365 Query 6157 ATCGTTCATAAAATAA-AACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACTG 6215 ||| ||| | || || ||||||||| || ||||| || || | ||| || || | Sbjct 80364 ATC-ATCAAAGAAGAAGAACGGATCGGCTAAGGTCCAGCCACCGACGGAAGGCAGAATCT 80306 Query 6216 TCAACGAAGGGTTGTGACGTTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACGCTT 6275 | || || || |||| | | ||||||||| ||||||||||||||||| | || Sbjct 80305 TTAAGTCGGGCCTGGCCTGTTTTAGAGACATCAGCTGACCAAAGTTACCCTTGTAAGGTT 80246 Query 6276 CGTTGTACGCCTCAAC--GCCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAAT 6333 | | | | || || || |||||||| || |||| || ||||| ||| ||||| Sbjct 80245 CAT--TCCAACTAGACAGACCCTTCTGTGGCTTCTGCAGGGCTGCCCATGGGTCATGAAT 80188 Query 6334 ACTCACCTTGAAGTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAG---GAATT 6390 | |||||||||||| ||||||||| ||| || || | ||| ||||| || Sbjct 80187 AGACACCTTGAAGTCCTCGCGACCACTGCAAGACCGTTGCAACGCGGCAAAGCTTCCATC 80128 Query 6391 GGGAATCTGCTTGAGGGCGTCGTTTATGCCGTTACCACCACAAATTGGAATGAACCCGTA 6450 | || | ||| | |||||| || || | |||||||||||| |||||||| ||||| Sbjct 80127 G---ATTTCCTTCAAACTGTCGTTGATACCATCACCACCACAAATAGGAATGAAACCGTA 80071 Query 6451 CAGCAGGTGCGTCAGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACAC 6510 ||| || || | ||| || || | ||| | ||| |||| || || | || ||| || Sbjct 80070 CAGAAGATGAGACAGGTTGGGCACTGGAATCTTATCAACTGGGAATTTCCTCGGATAGAC 80011 Query 6511 TCCCCACTCCACGAAATACGCACCGACGACCCTATCGGTTGTCCTCCTGAATGG 6564 ||||||||| ||||| || ||||||| || || ||| |||| | | ||||| Sbjct 80010 TCCCCACTCGACGAAGTATGCACCGATAACTTTACCGGATGTCTGCTTAAATGG 79957 >seq42682 Length=462070 Score = 116 bits (128), Expect = 2e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||||||||| |||||||| || |||||| ||| | |||| || Sbjct 302064 ACCAGGTGAAGAGTAGATTCTTTCTGGATGTTATAATCTGAAAGGGTTCTTCCATCTTCA 302005 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || || |||||| | || | || || ||||| | Sbjct 302004 AGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGAGGGATGCCTTCTTTGTCCTGA 301945 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | ||| | ||||| || | ||| ||||||| Sbjct 301944 ATTTTTGCTTTGAC--ATTCTCAATTGTGTCAGATGGTTCAACCTCTAAGGTAATGGTTT 301887 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| || ||||||||||||||| Sbjct 301886 TGCCTGTCAGAGTTTTGACAAAGATCTGCATA 301855 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| |||||||| || || || ||| | |||| |||||||| || || ||||| Sbjct 300923 TCCTTCTGTATGTTATAATCAGATAGAGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAG 300864 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | || |||||||| ||| || ||| || | Sbjct 300863 ATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTT 300804 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || ||||| || || | ||| || |||||||| ||||||||||| || Sbjct 300803 TCAATAGTGTCTGAAGCCTCTACCTCCAAGGTAATTGTTTTTCCAGTGAGAGTCTTGACG 300744 Query 34971 AAGATCTGCATATT 34984 || || ||||| || Sbjct 300743 AAAATTTGCATCTT 300730 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||||||||| || |||||| ||| | |||| |||||||| || || ||||| Sbjct 303870 TCCTTCTGAATGTTATAATCAGAAAGGGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAA 303811 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || |||||| | || | || |||||||| ||| || || || | Sbjct 303810 ATAAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTT 303751 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || ||||| || || | ||||| ||||| || || || || || ||| Sbjct 303750 TCAATAGTATCTGAAGCCTCTACCTCCAAAGTTATAGTTTTACCAGTCAGTGTTTTGACA 303691 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 303690 AAGATTTGCAT 303680 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || |||||||||||||| || || || ||| | |||| || Sbjct 304344 ACCAAGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGAGAGAGTTCTTCCATCTTCT 304285 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| ||||| || || || || | || | || ||||| || | Sbjct 304284 AGCTGTTTGCCAGCAAAAATTAGACGCTGTTGATCCGGGGGGATGCCTTCCTTATCTTGA 304225 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || ||||| || || || | || ||||||||| || | ||||| |||| Sbjct 304224 ATTTTAGCCTTGAC--ATTCTCAATAGTATCTGAGGCCTCAACCTCCAAAGTTATAGTTT 304167 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || || |||||||| ||||| Sbjct 304166 TACCAGTCAGTGTTTTGACAAAGATTTGCAT 304136 Score = 89.7 bits (98), Expect = 3e-13 Identities = 130/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 34803 TTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGC 34862 ||||| || |||||| ||| | |||| || || || || || ||||| || || || || Sbjct 301139 TTATAATCTGAAAGGGTTCTTCCATCTTCAAGTTGCTTGCCAGCAAAGATAAGACGCTGT 301080 Query 34863 TGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATT 34920 |||||| | || | || || ||||| ||| || |||||| || || || | | Sbjct 301079 TGGTCTGGAGGGATGCCTTCTTTGTCTTGAATTTTTGCTTTGAC--ATTCTCAATTGTGT 301022 Query 34921 CACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCA 34980 || | ||||| || | ||| |||||||| || || ||||| || ||||||||||||| Sbjct 301021 CAGATGGTTCAACCTCTAAGGTAATGGTTTTGCCTGTCAGAGTTTTGACAAAGATCTGCA 300962 Query 34981 TA 34982 || Sbjct 300961 TA 300960 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || || ||| | |||| |||||||| || || ||||| Sbjct 304099 TTCCTTCTGGATGTTGTAGTCAGATAGTGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAA 304040 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||| || || || |||||| | || | || ||||| || ||| || ||| || | Sbjct 304039 TATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTATCCTGAATTTTAGCTTTAAC--A 303982 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || | || || || | ||| |||||||| || || | ||| || Sbjct 303981 TTCTCAATAGTGTCGGAAGGTTCTACTTCCAAGGTGATGGTTTTGCCTGTCAAAGTTTTG 303922 Query 34968 ACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 303921 ACAAAGATCTGCATA 303907 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 || || || || |||| || ||| ||||| ||||| ||||| || || ||| | || Sbjct 303438 CTTAACACTAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCCA 303379 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || ||||| || || ||||| || || || || |||||| | || | || ||||| Sbjct 303378 TCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTA 303319 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||| || ||| || | | || | || ||||| || || | ||||| Sbjct 303318 TCCTGAATTTTAGCTTTCACATTTTCAATAGTATCTGAAGCCTCTACCTCCAAAGTTATA 303259 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || || || || ||||||||||||||| Sbjct 303258 GTTTTACCAGTCAGTGTTTTGACAAAGATCTGCATA 303223 >seq17913 Length=240356 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||| || ||||| | | ||||| |||| || || ||||||||||| ||||| || Sbjct 97859 TCCACCTCTCAAACGGAGTACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCTGA 97800 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | ||| |||| || ||||| || ||||| || || ||||| ||||||||| | || Sbjct 97799 TAGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGGGG 97740 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | || || ||||| || || |||||| | | || | ||| || |||||| Sbjct 97739 AATGCCTTCTTTGTCCTGGATTTTAGCTTTGACATTTTCGATTGTGTCAGAGGGCTCAAC 97680 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || |||||||| || || | || || || || ||||||||| Sbjct 97679 TTCGAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCATA 97631 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| | || ||||| |||| || || || |||||||| ||||| ||| Sbjct 96490 CCACCTCTCAAACGCAGTACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAA 96431 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | ||| |||| || ||||| || || || || || ||||| ||||||||| | || Sbjct 96430 AGTGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCGCTGCTGGTCTGGGGGA 96371 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||| || || || || || | | || | ||| || || || Sbjct 96370 ATGCCTTCCTTATCTTGGATTTTTGCCTTCACATTTTCAATTGTATCAGAGGGTTCCACC 96311 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | || ||||||||||| ||||| ||||| ||||| |||||||| || Sbjct 96310 TCTAATGTAATGGTTTTTCCGGTGAGTGTCTTAACAAATATCTGCATGTT 96261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324396017812872