Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq33365 129 7e-25 >seq33365 Length=5281 Score = 129 bits (142), Expect = 7e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | ||||| || || || | ||| |||||| |||||||||| ||| || || || Sbjct 4383 ATCTCTGATATATGTGTCTATCAACAAAGAATACATCTCAGAGTGAACATTCTCCATGGC 4442 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 || ||||| ||||| ||||| || ||||||| | ||| || || | | ||||||| Sbjct 4443 AATTTGAAATCCATAGAAACATCTGGCTTCAGTGACTTGCACTTCTTGGGAGAACCTCTC 4502 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | | |||||||| |||||||||||| || |||||||| || | |||| ||||| Sbjct 4503 CACAAGATTTTCATTGACTATCCCATCAGAGGCAGCAAAGAAGGCCAAGACATGCTTTAT 4562 Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCCAATC 37654 |||||| ||||| || | ||| ||| |||||| Sbjct 4563 AAAATGCCTTTCGCAATCTTTTAAACTTTCCCAATC 4598 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 37212 ATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATT 37271 || ||||||||| || || ||||| ||||||| || | || || | ||| |||||| Sbjct 3553 ATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCTTCAACCAGAATATT 3612 Query 37272 GCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTA 37331 | ||||||| ||||||||||| || || ||||| ||||||||||| |||| ||| Sbjct 3613 GATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATGCCACAATACGCTCT 3672 Query 37332 CCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACA 37391 || ||||||| ||| | || |||||| | | |||||||||||| || || Sbjct 3673 CCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTGCCTTCCTCTTTACG 3732 Query 37392 CATTCAATTGTTTCAATTGCTTTTAAGAGAAAGT 37425 ||| | |||||||| || || || | ||||| Sbjct 3733 CATGGCAGAGTTTCAATAGCATTAAACAAAAAGT 3766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591872199605960