Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq33365 116 7e-21
seq18227 86.0 1e-11
>seq33365
Length=5281
Score = 116 bits (128), Expect = 7e-21
Identities = 122/158 (77%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 25581 GCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAA 25640
||||||| | ||| | || ||||| |||||||| ||||||||||| ||||| || || ||
Sbjct 4569 GCATTTTATAAAGCATGTCTTGGCCTTCTTTGCTGCCTCTGATGGGATAGTCAATGAAAA 4510
Query 25641 TC-TGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTT 25699
|| |||| ||||| ||| || |||||||| | || |||| |||||||| || |
Sbjct 4509 TCTTGTG-GAGAGGTTCTCCCAAGAAGTGCAAGTCACTGAAGCCAGATGTTTCTATGGAT 4451
Query 25700 TCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTAT 25737
| || || ||||| || ||||| ||||||||| |||||
Sbjct 4450 TTCAAATTGCCATGGAGAATGTTCACTCTGAGATGTAT 4413
>seq18227
Length=276284
Score = 86.0 bits (94), Expect = 1e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 221509 GTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGC 221568
||||||||||||||| || || ||||| || |||||||||||| | || ||| ||
Sbjct 241095 GTCGGCCAGTCCCTGAACACCAATACCAATAGGCCTGTGTCTCATATTCGAATTCTTAGC 241036
Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628
|||||| || ||||| ||||| || || || | ||||| | || | |||||||||||
Sbjct 241035 TTCTGGTACTGGATAGAAGTTCACATCAATAATTTTGTTTAAATTTTGTGTGATGACTTT 240976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928147597482560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |