Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 98.7 5e-16
>seq18227
Length=276284
Score = 98.7 bits (108), Expect = 5e-16
Identities = 299/454 (66%), Gaps = 10/454 (2%)
Strand=Plus/Minus
Query 24686 GCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAA 24745
|| ||||| ||||| | ||| ||||||||||| || | | ||||| | || |||
Sbjct 241796 GCAGGTTTGGTTCTTAAATAGTACATTCCAGTCTTGAGCCCAATTTTCCAGGCATAGAAA 241737
Query 24746 TGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCT 24805
|| ||||| |||||||| | || | | | ||| | | || | ||||||
Sbjct 241736 TGAATTGAAGTTAGTTTCCCGTAATTAGGTTCTGCTACATGGATATTGAAAGATTGACTC 241677
Query 24806 TGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCG 24865
||| || ||| | |||||| ||||| | | ||| | || || | || || ||
Sbjct 241676 TGGTCAATAAATGCTCCTCTATCCGCAGCCATTTGAATAGTGGTCTTAACGGAAATCTCC 241617
Query 24866 TAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGAT 24925
| | |||||||| ||| | || || || ||| || |||||||||| | ||
Sbjct 241616 CACACAGTTTTGTACAAATCTCTAATTTCTTGGGGTATATTTTCAATATTTTGGATAGAA 241557
Query 24926 CCATTTTCTCTCAATAGATTCAATCT-CATATTCGGTGTCCAAAGATTAATTTTT--TCA 24982
||||| | | | |||| || ||| ||| | | |||| | | | | || |||
Sbjct 241556 CCATTGT-TATGAATAATGACATTCTTCATGT-CTTCGTCCCACAAGTCAGCTTGAGTCA 241499
Query 24983 AGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATT 25042
| ||| || | || || | ||| | | ||||||||||||||| ||||||||| |
Sbjct 241498 A-ATCCCTGAGTAAATGATGATTCACCACTTGAAATTCTCCAGACAACACTCTTCTT--T 241442
Query 25043 GATAA--GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAG 25100
| ||| |||||| || ||||||||||| ||||||| ||||| | || || | ||||
Sbjct 241441 GGTAAATGTTTGATGTAAATGGTTCAAATGATTCATTGTTTCCGAGAATCTGTGCTGTAG 241382
Query 25101 ATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
| || ||||||||| |||| || || |||||
Sbjct 241381 AAGCAGTTGGCATTGGAGCTAGCAAAAGTGAATT 241348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252854813387675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |