Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq18227 154 2e-32 >seq18227 Length=276284 Score = 154 bits (170), Expect = 2e-32 Identities = 884/1397 (63%), Gaps = 22/1397 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||||| || |||| || || || ||||| || || ||| | | Sbjct 240064 CCACAGCACATGCTTATGCGTGTTTCAATTGGAATACATGGGGAGGATATCGATGCAGCT 240123 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 75330 | | || || | |||| || ||| || | ||| || | ||||| ||||| Sbjct 240124 ATCAACACTTATAATTTACTGTCTGAAAAATATTTT-ACTCATGCCAGCCCAACTCTCTT 240182 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 | |||| || || | ||| || | || ||||| | || |||| || || || Sbjct 240183 CTCAGCTGCCACTCCCAAACCTCAATTATCATCATGCTTTTTAATAGCCATGAAAGATGA 240242 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| ||||||| | | ||||| || ||||| | ||||| Sbjct 240243 CAGCATAGAGGGAATATATGATACTCTTAAGCAATGTGCCTTGATATCAAAATCTGCTGG 240302 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 || ||||| |||| ||||| | ||||| || | |||| || ||||| Sbjct 240303 TGGGATTGGATTGCATGTCCATTGCATTAGAGCAAAAGGCACAACTATTGCTGGAACAAA 240362 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 |||| || ||||| | | || ||||| | || | ||| |||||| | ||||| Sbjct 240363 TGGTGTTTCGAATGGTCTAGTACCCATGCTCAGAGTGTATAATAACACAGCTAGATATGT 240422 Query 75571 AAATCAAGCGGGGCGTCGCAAGG--GGTCCATC-GCGGTCTACTTGGAACCATGGCATGC 75627 |||||| || | | | ||| ||| || || ||||| ||||| |||||||| Sbjct 240423 CGATCAAGGAGGAAATAAGAGGCCAGGTGCATTTGCAGTATACTTAGAACCGTGGCATGC 240482 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAG 75687 ||||| | ||||| || || | | || || | || || | ||| ||| Sbjct 240483 GGATATATTTGAGTTTCTGGATCTGAAAAAGAATACTGGCAAAGAGGAAGTTCGTGCTAG 240542 Query 75688 AGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGG 75747 || | |||| || ||||||| || || | |||||||| | ||||| ||| Sbjct 240543 GGAATTGTTTTATGCCTTGTGGATACCTGATTTATTCATGAAAAGAGTTGAAAGTAATGG 240602 Query 75748 TCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGA 75807 | ||| | | || || | || || || || | ||| | ||| || || Sbjct 240603 AAACTGGAGCTTGATGTGCCCTCATAATTGCCCCGGACTAACTGACACCTGGGGAGAAGA 240662 Query 75808 GTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT-GTACCAG 75866 |||||| ||| | || ||| |||||| ||||| || | | ||| || | | Sbjct 240663 GTTTGAGGCCTTATATGAAAAATATGAAAAGGAGAATA-ATTATGTTAGACAAGTTCGTG 240721 Query 75867 CCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926 | | | ||||| |||||| | || | || ||||||||||||||||| ||| Sbjct 240722 CTCAAGTATTATGGAAAGCTATTATAGAAGCCCAAGTAGAGACTGGAACACCATACATGT 240781 Query 75927 TTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCT 75986 | ||||| || | || |||| ||| || || ||||| ||||| ||||| || || || Sbjct 240782 TATACAAAGACTCCTGCAACAGGAAAAGCAATCAAAAAAATTTAGGAACGATTAAATGCA 240841 Query 75987 CAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATT 76046 ||||| || || |||||| | || ||||| | | ||||| |||||| || |||| Sbjct 240842 GCAATCTCTGTACTGAAATTGTTGAATACACTTCTGAAGATGAAGTGGCTGTATGTAATT 240901 Query 76047 TGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAA 76106 | || ||||| || | | || ||| || ||||| | |||| | ||| || Sbjct 240902 TAGCTTCAATAGCTTTGAATATGTTTGTAAACGAAGACA---AAACTTATAATTTCACAA 240958 Query 76107 AACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATT 76166 || | | ||||| |||| | | || ||||| ||||| | | ||||| || | Sbjct 240959 AATTAAAAGAAATATCAAAAGTCATCACACAAAATTTAAACAAAATTATTGATGTGAACT 241018 Query 76167 TTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225 | ||||| || ||| || || || |||||| ||||||| ||||||||| | ||| Sbjct 241019 TCTATCCAGTACCAGA-AGCTAAGAATTCGAATATGAGACACAGGCCTATTGGTATTGGT 241077 Query 76226 GTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||| || || || || |||| | | || || | | | ||| || |||| Sbjct 241078 GTTCAGGGACTGGCCGACACATTTGTCCTAATGAGACTGC-CCTATGAAAGTGAGAAAGC 241136 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | ||||| | || || |||||||| || | | | | ||||| || ||||| Sbjct 241137 GATATTATTGAATCAACAGATATTCGAAACCATTTACTATGGAGCTCTGGAAGCAAGTTG 241196 Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404 |||| | || ||| ||||| || || | || || ||| || ||||| Sbjct 241197 TGAACTAGCAGAAAAAGAAGGTGTATACAGTACTTACGAAGGAAGTCCAGCCAGTCAAGG 241256 Query 76405 GGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTT 76462 | ||||| | || |||| |||| | ||| | | | || | ||||| | Sbjct 241257 TATACTTCAATACGACATGT-GGAACAAAACACCTA-CAGATCTTTGGAACTGGACAGAG 241314 Query 76463 CTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGC 76520 ||||| || || ||| || | || ||||| || |||||| | || ||||||| Sbjct 241315 CTCAAAGATAAAATTGCAA--AGCATGGCCTTCGCAATTCACTTTTGCTAGCTCCAATGC 241372 Query 76521 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAA 76580 |||| || || || ||||| || | || || ||||||| |||||||||| ||| ||| Sbjct 241373 CAACTGCTTCTACAGCACAGATTCTCGGAAACAATGAATCATTTGAACCATTTACATCAA 241432 Query 76581 ACATCTACCTGAGAAGA 76597 |||| |||| |||||| Sbjct 241433 ACATTTACCAAAGAAGA 241449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596121807401120