Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq42682 145 1e-29 seq5822 140 6e-28 seq41782 131 3e-25 seq17913 122 2e-22 seq33365 107 3e-18 >seq42682 Length=462070 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| || |||| || | ||| | ||||| ||||| || || ||||| Sbjct 303225 ATACCTCCTCGGAGACGTAGCACCAGATGAAGAGTAGATTCTTTCTGGATGTTGTAATCA 303166 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | |||||||||||||| || | | |||||||||||| Sbjct 303165 GAGAGGGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCAGGA 303106 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||||||||| || |||||| ||||||||| || ||||| || | ||| Sbjct 303105 GGGATTCCTTCTTTATCCTGGATTTTAGCTTTTACATTCTCAATTGTATCGGAAGGTTCA 303046 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||| |||||||| || | ||||||| || |||||||| Sbjct 303045 ACTTCTAATGTAATAGTTTTACCTGTCAGGGTTTTAACAAAGATCTGCAT 302996 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | || ||||| || | ||||| ||||| ||| || || |||||||| Sbjct 301857 ATACCTCCACGTAGACGTAAGACAAGATGTAGAGTAGACTCCTTCTGTATGTTATAATCA 301798 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| || || | | || |||| || || |||||||| || | | ||| ||||| || Sbjct 301797 GATAGAGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGG 301738 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || |||||| || ||||| ||||||||||| | ||| Sbjct 301737 GGGATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTTTCAATAGTATCTGAAGCCTCT 301678 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||||||||||| |||||| | || || ||||| Sbjct 301677 ACCTCCAAAGTTATAGTTTTACCAGTTAGTGTTTTGACAAAGATTTGCAT 301628 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || || | ||| |||| || || || | ||||| ||| || ||| |||||||| || Sbjct 304362 CCTCCACGAAGACGTAGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGAG 304303 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || | | || || | ||||| ||||||||||||| | |||||| || || || Sbjct 304302 AGAGTTCTTCCATCTTCTAGCTGTTTGCCAGCAAAAATTAGACGCTGTTGATCCGGGGGG 304243 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||| |||||||| |||||| || ||||| ||||||||||| | || || Sbjct 304242 ATGCCTTCCTTATCTTGAATTTTAGCCTTGACATTCTCAATAGTATCTGAGGCCTCAACC 304183 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| || ||||||||||| | |||||| | || || ||||| Sbjct 304182 TCCAAAGTTATAGTTTTACCAGTCAGTGTTTTGACAAAGATTTGCAT 304136 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | || ||||| || | ||| | ||||| ||| || ||| |||||||| Sbjct 303909 ATACCTCCACGTAGACGTAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCA 303850 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || |||| || || ||||||||||| | | ||||||||| || Sbjct 303849 GAAAGGGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGTTGGTCTGGG 303790 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || |||||| || ||||| ||||||||||| | ||| Sbjct 303789 GGGATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTTTCAATAGTATCTGAAGCCTCT 303730 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||||||||| | |||||| | || || ||||| Sbjct 303729 ACCTCCAAAGTTATAGTTTTACCAGTCAGTGTTTTGACAAAGATTTGCAT 303680 Score = 123 bits (136), Expect = 5e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 |||| ||| |||||||| | ||||| || || || || || || || | || || | Sbjct 303441 AGTCTTAACACTAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTT 303382 Query 171912 TCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCT 171971 | || || | || || |||||||| || | | ||||||||| || || || ||||| Sbjct 303381 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGGATGCCTTCC 303322 Query 171972 TTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTA 172031 ||||| || |||||| ||| ||||| ||||||||||| | ||||| || | ||| Sbjct 303321 TTATCCTGAATTTTAGCTTTCACATTTTCAATAGTATCTGAAGCCTCTACCTCCAAAGTT 303262 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||||||||| | |||||| | || |||||||| Sbjct 303261 ATAGTTTTACCAGTCAGTGTTTTGACAAAGATCTGCAT 303224 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| ||| || | ||| | || | ||||| ||||| || ||||||||| Sbjct 302313 ATACCTCCTCGAAGACGCAGTACCAGGTGAAGAGTAGATTCTTTCTGGATGTTATAATCT 302254 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | || || |||||||| || | | ||||||||| || Sbjct 302253 GAAAGGGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGG 302194 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || || || ||||| ||| ||||| || || || || | |||| Sbjct 302193 GGAATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCAATTGTGTCAGATGGTTCT 302134 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| ||||||||||| || || | ||||| | || |||||||| Sbjct 302133 ACCTCTAGCGTAATGGTTTTGCCTGTCAGAGTTTTGACAAAAATCTGCAT 302084 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 |||| ||| |||||||| | ||| | || || || || || || || | || || | Sbjct 302757 AGTCTTAACACTAAATGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTT 302698 Query 171912 TCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCT 171971 | || || | || || |||||||| || | | ||||||||| || || || ||||| Sbjct 302697 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGGATGCCTTCC 302638 Query 171972 TTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTA 172031 || || || |||||| ||||||||| ||||||||||| | ||||| || | ||| Sbjct 302637 TTGTCCTGAATTTTAGCTTTTACATTTTCAATAGTATCTGAAGCCTCTACCTCCAAAGTT 302578 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||||||||| | |||||| | || || ||||| Sbjct 302577 ATAGTTTTACCAGTCAGTGTTTTGACAAAGATTTGCAT 302540 Score = 113 bits (124), Expect = 8e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 || |||| |||||||| | || | || || || |||||||| || || | || | Sbjct 302529 AGACGTAGAACTAAATGCAGGGTGGATTCCTTCTGGATGTTATAATCGGA-AAGGGTCCT 302471 Query 171912 TCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTC 171970 || || |||| || || |||||||| || | | ||||||||| || || || ||||| Sbjct 302470 TCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTC 302411 Query 171971 TTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGT 172030 ||||| || |||||| ||| ||||| ||||| || || | ||||||||||| || Sbjct 302410 CTTATCCTGAATTTTAGCTTTAACATTCTCAATAGTGTCGGAAGGTTCTACTTCTAAGGT 302351 Query 172031 AATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||||| || || | ||||| | || |||||||| Sbjct 302350 AATGGTTTTGCCGGTCAGAGTTTTGACAAAAATCTGCAT 302312 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| ||| || | ||| | || | ||||| ||||| || ||||||||| Sbjct 302085 ATACCTCCTCGAAGACGCAGTACCAGGTGAAGAGTAGATTCTTTCTGGATGTTATAATCT 302026 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | || || |||||||| || | | ||||||||| || Sbjct 302025 GAAAGGGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGA 301966 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || ||||| ||| ||||| || || || || | ||| Sbjct 301965 GGGATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTCTCAATTGTGTCAGATGGTTCA 301906 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| ||||||||||| || || | ||||| | || |||||||| Sbjct 301905 ACCTCTAAGGTAATGGTTTTGCCTGTCAGAGTTTTGACAAAGATCTGCAT 301856 Score = 102 bits (112), Expect = 1e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 171891 TTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGT 171950 ||||||||||| | | || | | || || | ||| || |||||||| || | | |||| Sbjct 301139 TTATAATCTGAAAGGGTTCTTCCATCTTCAAGTTGCTTGCCAGCAAAGATAAGACGCTGT 301080 Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010 ||||| || || || |||||||| ||||| ||||| ||| ||||| || || || Sbjct 301079 TGGTCTGGAGGGATGCCTTCTTTGTCTTGAATTTTTGCTTTGACATTCTCAATTGTGTCA 301020 Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| || |||| ||||||||||| || || | ||||| | || |||||||| Sbjct 301019 GATGGTTCAACCTCTAAGGTAATGGTTTTGCCTGTCAGAGTTTTGACAAAGATCTGCAT 300961 >seq5822 Length=633359 Score = 140 bits (154), Expect = 6e-28 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 |||| || | ||||| ||||| | |||||| |||| |||||| ||||| || || | Sbjct 415197 TACCTCCGCGAAGTCTCAATACAAGATGTAAGGTAGACTCTTTCTGGATATTGTAGTCAG 415138 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 ||| | || |||| ||||| || || |||||||||||||| | || || || |||| Sbjct 415137 ATAGCGTACGGCCGTCTTCCAACTGCTTGCCAGCAAAAATTAAACGTTGCTGATCTGGTG 415078 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | |||||||| |||||||| || ||| ||| ||||| ||||| || || | ||| | Sbjct 415077 GGATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTCTCAATAGTGTCGGAAGCTTCCA 415018 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAA 172080 | || || || || || || || |||| ||||| | || ||||||||| | || | || Sbjct 415017 CCTCGAGGGTGATAGTCTTGCCCGTTAGGGTTTTGACAAAAATCTGCATTGTGTTCTGAA 414958 Query 172081 AA 172082 || Sbjct 414957 AA 414956 >seq41782 Length=81921 Score = 131 bits (144), Expect = 3e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 171858 AATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCA 171917 ||||| | |||||| |||| |||||| ||||| || || |||| | || |||| Sbjct 22882 AATACAAGATGTAAGGTAGACTCTTTCTGGATATTGTAGTCAGATAGCGTACGGCCGTCT 22823 Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 ||||| || || |||||||||||||| | || || || ||||| |||||||| |||||| Sbjct 22822 TCCAACTGCTTGCCAGCAAAAATTAAACGTTGCTGATCTGGTGGGATTCCTTCCTTATCT 22763 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || || ||| ||| ||||| ||||| || || | ||| || || || || || || Sbjct 22762 TGAATCTTAGCTTTAACATTCTCAATAGTGTCGGAAGCTTCCACCTCGAGGGTGATAGTC 22703 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAAA 172082 || || |||| ||||| | || ||||||||| | || | |||| Sbjct 22702 TTGCCCGTTAGGGTTTTGACAAAAATCTGCATTGTGTTCTGAAAA 22658 >seq17913 Length=240356 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| ||||||| || | ||| || ||| || || ||| Sbjct 96721 ATACCACCTCTCAAACGCAGTACCAAATGTAGGGTCGACTCCTTTTGAATGTTGTAGTCT 96662 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | |||| | || || | || || || || || || | || ||| ||||| || Sbjct 96661 GATAGTGTTCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGG 96602 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || |||||| ||| ||||| || || ||||| | ||| Sbjct 96601 GGAATGCCTTCTTTGTCCTGGATTTTAGCTTTGACATTTTCGATTGTGTCTGAGGGTTCA 96542 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||| ||||| || ||||| | ||| || ||||| Sbjct 96541 ACCTCCAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATTTGCAT 96492 Score = 118 bits (130), Expect = 2e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| ||||| | |||| ||| || ||| || || ||| Sbjct 96493 ATACCACCTCTCAAACGCAGTACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCT 96434 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || || | || || ||||| || || | || ||| ||||| || Sbjct 96433 GAAAGTGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCGCTGCTGGTCTGGG 96374 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| || ||||| || ||||| || | ||| Sbjct 96373 GGAATGCCTTCCTTATCTTGGATTTTTGCCTTCACATTTTCAATTGTATCAGAGGGTTCC 96314 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || |||| ||||||||||| || || | ||| |||| ||||||||||| || Sbjct 96313 ACCTCTAATGTAATGGTTTTTCCGGTGAGTGTCTTAACAAATATCTGCATGTT 96261 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| ||||||| || | ||| || || || || ||| Sbjct 96949 ATACCACCTCTCAAACGCAGTACCAAATGTAGGGTCGACTCCTTTTGGATGTTGTAGTCT 96890 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || || | || || || || || || | || ||| ||||| ||| Sbjct 96889 GAAAGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGT 96830 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || ||||| ||| ||||| || ||||| || | ||| Sbjct 96829 GGAATGCCTTCTTTGTCCTGGATTTTTGCTTTGACATTTTCAATTGTATCAGAGGGTTCA 96770 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||| ||||| || ||||| | ||| |||||||| Sbjct 96769 ACCTCGAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 96720 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| ||||| | || | ||| || || || || ||| Sbjct 97177 ATACCACCTCTCAAACGCAGTACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCT 97118 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || || | || || || || || || | || ||| ||||| || Sbjct 97117 GAAAGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGG 97058 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| ||| ||||| || || || || | ||| Sbjct 97057 GGAATGCCTTCTTTGTCTTGGATTTTCGCTTTGACATTTTCGATTGTGTCAGAGGGTTCA 96998 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||| ||||| || ||||| | ||| |||||||| Sbjct 96997 ACCTCGAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 96948 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| ||||| | || | ||| || || || || ||| Sbjct 97405 ATACCACCTCTCAAACGCAGTACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCT 97346 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || || | || || || || || || | || ||| ||||| || Sbjct 97345 GAAAGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGG 97286 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || |||||| ||| ||||| || || || || | || Sbjct 97285 GGAATGCCTTCTTTGTCCTGGATTTTAGCTTTGACATTTTCGATTGTGTCAGAGGGCTCA 97226 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||| ||||| || ||||| | ||| |||||||| Sbjct 97225 ACCTCGAGCGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 97176 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||||||||| | || | ||| || || || || ||| Sbjct 97633 ATACCACCTCTCAAACGCAGTACTAAATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCT 97574 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || || | || || || || || || | || ||| || || ||| Sbjct 97573 GAAAGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGATCTGGT 97514 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || |||||| ||| ||||| || || || || | || Sbjct 97513 GGAATGCCTTCTTTGTCCTGGATTTTAGCTTTGACATTTTCGATTGTGTCAGAGGGCTCA 97454 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || ||||| ||||| || ||||| | ||| |||||||| Sbjct 97453 ACCTCGAGTGTGATAGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 97404 >seq33365 Length=5281 Score = 107 bits (118), Expect = 3e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 39159 GATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAAT 39218 || || ||||||||||| || || ||||| ||||||| || | ||| || | ||| ||| Sbjct 3550 GAAATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCTTCAACCAGAAT 3609 Query 39219 ATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTATTCTT 39278 |||||||||||||| | |||||||||||| ||||| ||| |||||||| | || | Sbjct 3610 ATTGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATGCCACAATACGC 3669 Query 39279 GCTCCAAACATTAATTTATCATCTA-AAATCCAATTTATGGCCCAATCTGCttttttttt 39337 ||||||| || | | ||| |||||| | | ||||||||||| || | || Sbjct 3670 TCTCCAAAAGTTGCACTCT-TGCTAGCAATCCACTGCAGAGCCCAATCTGCCTTCCTCTT 3728 Query 39338 GATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370 | | || | | |||| ||||| ||||| || Sbjct 3729 TACGCATGGCAGAGTTTCAATAGCATTAAACAA 3761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904456593604200