Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq42682 118 2e-21
seq17913 105 1e-17
>seq42682
Length=462070
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || | || |||||||||||||| | || ||||| | |
Sbjct 300734 TGCAAATTTTCGTCAAGACTCTCACTGGAAAAACAATTACCTTGGAGGTAGAGGCTTCAG 300793
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| ||||||| ||| |||||| ||| || |||||||| || || || || |
Sbjct 300794 ACACTATTGAAAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATCCCCCCAGACCAGC 300853
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | ||||| ||||| || || || | || ||| ||||| || | |||||||| |
Sbjct 300854 AGCGTCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGAAGAACTCTATCTGATTATAACA 300913
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|||| || || || ||| | ||| | || ||||| || | |||||||
Sbjct 300914 TACAGAAGGAGTCTACTCTACATCTTGTCTTACGTCTACGTGGAGGTA 300961
Score = 107 bits (118), Expect = 3e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| | ||||| ||||| ||||| | || ||||||| | ||
Sbjct 303453 TGCAGATCTTTGTTAAAACCCTGACAGGTAAAACTATTACATTGGAAGTAGAACCTTCCG 303512
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || |||||| || ||||||||||| || || || ||||
Sbjct 303513 ACACTATTGAGAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCAAC 303572
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | ||||| ||||| || || || | || ||| ||||| | | |||||||| |
Sbjct 303573 AGCGTCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGAAGAACCCTTTCTGATTATAACA 303632
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| || || ||||| || | |||||||| ||||
Sbjct 303633 TCCAGAAGGAATCTACCCTGCATTTAGTTCTACG 303666
Score = 105 bits (116), Expect = 1e-17
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | |||||| | || || ||||| || ||| | || ||||| | |
Sbjct 302541 TGCAAATCTTTGTCAAAACACTGACTGGTAAAACTATAACTTTGGAGGTAGAGGCTTCAG 302600
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||||||| |||||| || || |||||||| || || || ||||
Sbjct 302601 ATACTATTGAAAATGTAAAAGCTAAAATTCAGGACAAGGAAGGCATCCCCCCAGACCAAC 302660
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || || ||||| || || || | || ||| ||||| | | || || || |
Sbjct 302661 AGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGAACTCTCTCCGACTACAACA 302720
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || ||||| ||| | |||||||| ||| || | | |||||
Sbjct 302721 TCCAGAAGGAATCAACTCTTCATTTAGTGTTAAGACTCCGTGGAGG 302766
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| | ||||| ||||| ||||| | || || |||| |
Sbjct 301857 TGCAGATCTTTGTCAAAACTCTGACAGGCAAAACCATTACCTTAGAGGTTGAACCATCTG 301916
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| ||| ||||| || ||||||||||| || || || ||||
Sbjct 301917 ACACAATTGAGAATGTCAAAGCAAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCAAC 301976
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || || ||||| || || || | || ||| ||||| | |||||||||| |
Sbjct 301977 AGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGAACCCTTTCAGATTATAACA 302036
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || |||||||| ||| | || | ||| | || | |||||||||
Sbjct 302037 TCCAGAAAGAATCTACTCTTCACCTGGTACTGCGTCTTCGAGGAGGTA 302084
>seq17913
Length=240356
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| || || || ||||| || || | || || |||| |
Sbjct 96493 TGCAAATTTTCGTAAAAACCTTGACTGGCAAAACCATCACACTGGAGGTTGAACCCTCAG 96552
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| |||||| || |||||||||||||| || || || |
Sbjct 96553 ACACAATCGAAAATGTCAAAGCTAAAATCCAGGACAAAGAAGGCATTCCCCCAGACCAGC 96612
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| |||| || |||| || || |
Sbjct 96613 AGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGAACACTATCAGACTACAACA 96672
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || ||||| | ||||| ||| | || || ||||| ||||
Sbjct 96673 TTCAAAAGGAGTCGACCCTACATTTGGTACTGCGTTTGAGAGGTGGTA 96720
Score = 100 bits (110), Expect = 4e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| || || || ||||| || || | || || |||| |
Sbjct 96721 TGCAGATTTTCGTAAAAACCTTGACTGGCAAAACCATCACACTCGAGGTTGAACCCTCTG 96780
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| ||||| || ||||||||||||||||| || || |
Sbjct 96781 ATACAATTGAAAATGTCAAAGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCAGC 96840
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| | || | |||| || || |
Sbjct 96841 AGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACACTTTCAGACTACAACA 96900
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || ||||| | ||||| ||| | || || ||||| ||||
Sbjct 96901 TCCAAAAGGAGTCGACCCTACATTTGGTACTGCGTTTGAGAGGTGGTA 96948
Score = 100 bits (110), Expect = 4e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| || || || ||||| || || | || || || | |
Sbjct 97405 TGCAGATTTTCGTAAAAACCTTGACTGGCAAAACTATCACACTCGAGGTTGAGCCCTCTG 97464
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| |||||| || ||||||||||||||||| ||||| |
Sbjct 97465 ACACAATCGAAAATGTCAAAGCTAAAATCCAGGACAAAGAAGGCATTCCACCAGATCAGC 97524
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| | || | |||| || || |
Sbjct 97525 AGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACACTTTCAGACTACAACA 97584
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || ||||| | ||||||||| | || || ||||| ||||
Sbjct 97585 TCCAAAAGGAGTCGACCCTTCATTTAGTACTGCGTTTGAGAGGTGGTA 97632
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || ||| | || |||||||| ||||| | || || |||| |
Sbjct 96265 TGCAGATATTTGTTAAGACACTCACCGGAAAAACCATTACATTAGAGGTGGAACCCTCTG 96324
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| || ||||| ||| ||| ||||||||||| || || || |
Sbjct 96325 ATACAATTGAAAATGTGAAGGCAAAAATCCAAGATAAGGAAGGCATTCCCCCAGACCAGC 96384
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| | || | |||| || || |
Sbjct 96385 AGCGACTTATCTTCGCTGGCAAGCAGCTTGAAGATGGACGCACACTTTCAGACTACAACA 96444
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || || || | ||||| ||| | || || ||||| ||||
Sbjct 96445 TTCAAAAGGAGTCTACCCTTCATTTGGTACTGCGTTTGAGAGGTGGTA 96492
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| || || || ||||| || || | || || |||| |
Sbjct 96949 TGCAGATTTTCGTAAAAACCTTGACTGGCAAAACCATCACACTCGAGGTTGAACCCTCTG 97008
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| ||||| ||| |||||||||||||| || || || |
Sbjct 97009 ACACAATCGAAAATGTCAAAGCGAAAATCCAAGACAAAGAAGGCATTCCCCCAGACCAGC 97068
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| | || | |||| || || |
Sbjct 97069 AGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACACTTTCAGACTACAACA 97128
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || ||||| | ||||| ||| | || || ||||| ||||
Sbjct 97129 TCCAAAAGGAGTCGACCCTTCATTTGGTACTGCGTTTGAGAGGTGGTA 97176
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| || || || ||||| || || | || || || | |
Sbjct 97177 TGCAGATTTTCGTAAAAACCTTGACTGGCAAAACCATCACGCTCGAGGTTGAGCCCTCTG 97236
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| |||||| || |||||||||||||| || || || |
Sbjct 97237 ACACAATCGAAAATGTCAAAGCTAAAATCCAGGACAAAGAAGGCATTCCCCCAGACCAGC 97296
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| | || | |||| || || |
Sbjct 97297 AGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACACTTTCAGACTACAACA 97356
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || ||||| | ||||| ||| | || || ||||| ||||
Sbjct 97357 TCCAAAAGGAGTCGACCCTTCATTTGGTACTGCGTTTGAGAGGTGGTA 97404
Score = 84.2 bits (92), Expect = 3e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| || || || ||||| || || | || || || | |
Sbjct 97633 TGCAGATTTTCGTAAAAACCTTGACTGGCAAAACCATCACACTCGAAGTTGAGCCCTCTG 97692
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| |||||| || |||||||||||||| || || || |
Sbjct 97693 ACACAATCGAAAATGTCAAAGCTAAAATCCAGGACAAAGAAGGCATTCCCCCAGACCAGC 97752
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || || || | || ||| | || || |||| || || |
Sbjct 97753 AGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACACTATCAGACTACAACA 97812
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || || ||||| | ||||| ||| | || || ||||| ||
Sbjct 97813 TTCAGAAGGAGTCGACCCTTCATTTGGTACTCCGTTTGAGAGGTGG 97858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785576293673080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |