Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq42017 84.2 3e-11 >seq42017 Length=1023271 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 192952 ATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGA 193009 ||||||| || ||||| || ||||||||| | | | || || ||||| ||||| | Sbjct 312500 ATTATCCCCATAAACCACTAGTTACCACAAGGTCTATGGAATATTTACGTT-TTAGAGAA 312558 Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069 | ||| |||||||||| | ||||| || || ||||||||||| ||||||||||| Sbjct 312559 CT-TCCTGCTGGTATTAATTCAATTGTAGCGATTTTGTGCTATACTGGATATAATCAAGA 312617 Query 193070 AGACAGTATTATTTTAAAT 193088 ||||||| |||| || ||| Sbjct 312618 AGACAGTGTTATCTTGAAT 312636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634700827753720