Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq17913 111 1e-19
seq42682 105 6e-18
>seq17913
Length=240356
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || | || |||||||||| || |||||||||||||||||| || |
Sbjct 96718 CCACCTCTCAAACGCAGTACCAAATGTAGGGTCGACTCCTTTTGAATGTTGTAGTCTGAT 96659
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || || |||||||| || || || || | ||||||||||| | |||
Sbjct 96658 AGTGTTCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGGGGA 96599
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || |||||| ||| ||| || || | | || | | ||||| | ||| ||
Sbjct 96598 ATGCCTTCTTTGTCCTGGAT-TTTAGCTTTGACATTTTCGATTGTGTCTGAGGGTTCAAC 96540
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| ||||| || ||||| ||||| || || || |||||
Sbjct 96539 CTCCAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATTTGCAT 96492
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || | || |||||||| | ||| |||||||||||||||||| || |
Sbjct 96490 CCACCTCTCAAACGCAGTACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAA 96431
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || || | ||||||||||| | |||
Sbjct 96430 AGTGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCGCTGCTGGTCTGGGGGA 96371
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||| || ||| ||| ||||| | || | | || || | |||||||
Sbjct 96370 ATGCCTTCCTTATCTTGGATTTTTGCCTTCACATTTTCAATTGTATCAGAGGGTTCCACC 96311
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || ||||| || || | || || ||||||||||||||
Sbjct 96310 TCTAATGTAATGGTTTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 96264
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || | || |||||||||| || ||||||||| |||||||| || |
Sbjct 96946 CCACCTCTCAAACGCAGTACCAAATGTAGGGTCGACTCCTTTTGGATGTTGTAGTCTGAA 96887
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || || | ||||||||||| | |||
Sbjct 96886 AGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGTGGA 96827
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || |||||| ||| |||||| || | | || | | || || | ||| ||
Sbjct 96826 ATGCCTTCTTTGTCCTGGAT-TTTTGCTTTGACATTTTCAATTGTATCAGAGGGTTCAAC 96768
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 96767 CTCGAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 96720
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || | || |||||||| | || ||||||||| |||||||| || |
Sbjct 97402 CCACCTCTCAAACGCAGTACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCTGAA 97343
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || || | ||||||||||| | |||
Sbjct 97342 AGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGGGGA 97283
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || |||||| ||| ||| || || | | || | | ||||| | || ||
Sbjct 97282 ATGCCTTCTTTGTCCTGGAT-TTTAGCTTTGACATTTTCGATTGTGTCAGAGGGCTCAAC 97224
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | |||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 97223 CTCGAGCGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 97176
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || | || |||||||| | || ||||||||| |||||||| || |
Sbjct 97174 CCACCTCTCAAACGCAGTACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCTGAA 97115
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || || | ||||||||||| | |||
Sbjct 97114 AGTGTGCGTCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGGGGA 97055
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || ||||| ||| ||| || || | | || | | ||||| | ||| ||
Sbjct 97054 ATGCCTTCTTTGTCTTGGAT-TTTCGCTTTGACATTTTCGATTGTGTCAGAGGGTTCAAC 96996
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 96995 CTCGAGTGTGATGGTTTTGCCAGTCAAGGTTTTTACGAAAATCTGCAT 96948
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|||||||| | || |||||| ||||||||||| || | | || || | || ||
Sbjct 97840 ACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCTTCA 97781
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || || || || | ||||||||||| | |||| || || |||||| |
Sbjct 97780 AGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGG 97721
Query 35648 ATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|| ||| || || | | || | | ||||| | || || || | ||||| |||||
Sbjct 97720 AT-TTTAGCTTTGACATTTTCGATTGTGTCAGAGGGCTCAACTTCGAGTGTGATGGTTTT 97662
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| ||||| ||||| || || ||||||||
Sbjct 97661 GCCAGTCAAGGTTTTTACGAAAATCTGCAT 97632
>seq42682
Length=462070
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|| ||||| | ||| ||||| || |||||||| || | | |||| | || |||
Sbjct 304116 ACTAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGATAGTGTTCTTCCATCTTCC 304057
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || |||||||| | ||||| ||||| | ||| | || ||||| ||| ||
Sbjct 304056 AGCTGCTTGCCAGCAAATATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTATCC-TG 303998
Query 35648 ATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
| ||| || || | | | | | |||||| | ||| || |||| ||||| |||||
Sbjct 303997 AATTTTAGCTTTAACATTCTCAATAGTGTCGGAAGGTTCTACTTCCAAGGTGATGGTTTT 303938
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| ||||||||||| ||||| ||||||||
Sbjct 303937 GCCTGTCAAAGTTTTGACAAAGATCTGCAT 303908
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||||| | || || | ||| | ||| |||||| |||||||| ||||| |
Sbjct 303906 CCTCCACGTAGACGTAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAGAA 303847
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || ||||||||||| || ||||| || | ||||| ||||| | ||
Sbjct 303846 AGGGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGTTGGTCTGGGGGG 303787
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||| ||| | ||||| | || | | || || | || ||
Sbjct 303786 ATGCCTTCCTTGTCC-TGAATTTTAGCCTTCACATTTTCAATAGTATCTGAAGCCTCTAC 303728
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || |||||||| |||| ||||| ||||| || |||||
Sbjct 303727 CTCCAAAGTTATAGTTTTACCAGTCAGTGTTTTGACAAAGATTTGCAT 303680
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||||| | || || | ||||| ||| |||||| || ||||| ||||| |
Sbjct 301854 CCTCCACGTAGACGTAAGACAAGATGTAGAGTAGACTCCTTCTGTATGTTATAATCAGAT 301795
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| | || ||||||||||| || ||||| || | ||||||||||| | ||
Sbjct 301794 AGAGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGG 301735
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||| ||| | ||||| | || | | || || | || ||
Sbjct 301734 ATGCCTTCCTTGTCC-TGAATTTTAGCCTTCACATTTTCAATAGTATCTGAAGCCTCTAC 301676
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || |||||||| || | ||||| ||||| || |||||
Sbjct 301675 CTCCAAAGTTATAGTTTTACCAGTTAGTGTTTTGACAAAGATTTGCAT 301628
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|| ||||| | ||| ||||| || ||||| ||||| | | ||||| | || |||
Sbjct 303660 ACTAAATGCAGGGTAGATTCCTTCTGGATGTTATAATCAGAAAGGGTTCTTCCATCTTCC 303601
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || ||||| || | ||||| ||||| | ||| | || || |||||| ||
Sbjct 303600 AGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCTTTGTCC-TG 303542
Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
| ||| | ||| | | | | | |||||| | ||| || |||| || || |||||
Sbjct 303541 AATTTTAGCCTTAACATTCTCAATAGTGTCGGAAGGTTCTACTTCCAATGTAATAGTTTT 303482
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| |||| ||||| ||||| ||||||||
Sbjct 303481 ACCTGTCAGGGTTTTAACAAAGATCTGCAT 303452
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || ||||| ||||||| | ||| | | || ||||||||||| || |||||
Sbjct 302502 TCCTTCTGGATGTTATAATCGGAAAGGGTCCTTCCATCTTCCAGCTGCTTGCCAGCAAAG 302443
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664
|| | ||||| ||||| | ||| | || ||||| ||| ||| ||| || || | | |
Sbjct 302442 ATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTATCC-TGAATTTTAGCTTTAACATT 302384
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| | ||| || || | || || ||||| || |||| |||||| ||
Sbjct 302383 CTCAATAGTGTCGGAAGGTTCTACTTCTAAGGTAATGGTTTTGCCGGTCAGAGTTTTGAC 302324
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 302323 AAAAATCTGCAT 302312
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||||| | || || | ||||| ||| |||||| || ||||| ||||| |
Sbjct 300959 CCTCCACGTAGACGTAAGACAAGATGTAGAGTAGACTCCTTCTGTATGTTATAATCAGAT 300900
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| | || ||||||||||| || ||||| || | ||||||||||| | ||
Sbjct 300899 AGAGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGG 300840
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || ||||||| | ||| ||| || |||| | || | | ||||| | || ||
Sbjct 300839 ATGCCTTCCTTGT-CTTGAATTTTAGCTTTCACATTTTCAATAGTGTCTGAAGCCTCTAC 300781
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || ||||| || || | ||| || || || || |||||
Sbjct 300780 CTCCAAGGTAATTGTTTTTCCAGTGAGAGTCTTGACGAAAATTTGCAT 300733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450455228688920
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