Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 96.9 4e-15
>seq18227
Length=276284
Score = 96.9 bits (106), Expect = 4e-15
Identities = 243/366 (66%), Gaps = 5/366 (1%)
Strand=Plus/Minus
Query 118527 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG 118586
|| || || || || ||||| | ||||| || | ||||||||||| || ||| |||
Sbjct 241094 TCGGCCAGTCCCTGAACACCAATACCAATAGGCCTGTGTCTCATATTCGAATTCTTAGC- 241036
Query 118587 GTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 118645
||| || ||||| || ||| ||| |||| | |||| ||||| |||| || ||
Sbjct 241035 TTCTGGTACTGGATAGAAGTTCACATCAATAATTTTGTTTAAATTTTGTGTGATGACTTT 240976
Query 118646 TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG 118705
|| ||||| | | ||| | ||| | || | | ||||| || ||| || ||
Sbjct 240975 TGATATTTCTTTTAATTTTGTGAAATTATAAGT---TTTGTCTTCGTTTACAAACATATT 240919
Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765
| || ||||| || | |||||| |||| ||||| | | |||||| || | |||
Sbjct 240918 CAAAGCTATTGAAGCTAAATTACATACAGCCACTTCATCTTCAGAAGTGTATTCAACAAT 240859
Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825
||| || || | || | ||||| || || || || |||||||| || ||||
Sbjct 240858 TTCAGTACAGAGATTGCTGCATTTAATCGTTCCTAAATTTTTTTGATTGCTTTTCCTGTT 240799
Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885
|| | || ||||| | ||||||||| || || ||||| ||||| | | ||||||
Sbjct 240798 GCAGGAGTCTTTGTATAACATGTATGGTGTTCCAGTCTCTACTTGGGCTTCTATAATAGC 240739
Query 118886 CTTCCA 118891
|||||
Sbjct 240738 TTTCCA 240733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 617970994808440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |