Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq18227 132 6e-26 >seq18227 Length=276284 Score = 132 bits (146), Expect = 6e-26 Identities = 252/366 (69%), Gaps = 5/366 (1%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 |||||||||||| | | | ||| |||||||| |||||||||||| | ||||||||| Sbjct 240733 TGGAAAGCTATTATAGAAGCCCAAGTAGAGACTGGAACACCATACATGTTATACAAAGAC 240792 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 |||| ||| || || |||||||| ||||| || ||| || | |||||||||| Sbjct 240793 TCCTGCAACAGGAAAAGCAATCAAAAAAATTTAGGAACGATTAAATGCAGCAATCTCTGT 240852 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || ||||| | |||| || ||||||| |||||| ||||| | || ||||| Sbjct 240853 ACTGAAATTGTTGAATACACTTCTGAAGATGAAGTGGCTGTATGTAATTTAGCTTCAATA 240912 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 105127 ||| | | || ||| | | ||||||| || | | ||| |||| | | ||| Sbjct 240913 GCTTTGAATATGTTTGT--AAACGAAGACAAA-ACTTATAATTTCACAAAATTAAAAGAA 240969 Query 105128 GTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 105186 | | ||| |||| |||| |||||| | |||||||| || || || || || Sbjct 240970 ATATCAAAAGTCATCACACAAAATTTAAACAAAATTATTGATGTGAACTTCTATCCAGTA 241029 Query 105187 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCT 105246 ||| ||| || || |||||||||||| | || |||||| | ||||||||||| || Sbjct 241030 CCAGA-AGCTAAGAATTCGAATATGAGACACAGGCCTATTGGTATTGGTGTTCAGGGACT 241088 Query 105247 CGCGGA 105252 || || Sbjct 241089 GGCCGA 241094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582822997152760