Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq17913 84.2 2e-11
>seq17913
Length=240356
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||| || ||||| | ||||| ||| || ||| | || || ||| | |
Sbjct 96720 ATGCAGATTTTCGTAAAAACCTTGACTGGCAAAACCATCACACTCGAGGTTGAACCCTCT 96779
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | ||| |||||| |||||| ||||||||||| |||| || |
Sbjct 96780 GATACAATTGAAAAT--GTCAAAGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACC 96837
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || | || || ||||| || || | || || | ||||| | || || ||||
Sbjct 96838 AGCAGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACACTTTCAGACTACA 96897
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | |||||||| |||||||| | || ||
Sbjct 96898 ACATCCAAAAGGAGTCGACCCTACATTTGGTACTGCGTTTGAGAGGTGG 96946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355601963103423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |