Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq18227 574 7e-159
seq33365 122 1e-22
seq33683 96.9 5e-15
>seq18227
Length=276284
Score = 574 bits (636), Expect = 7e-159
Identities = 1217/1798 (68%), Gaps = 35/1798 (2%)
Strand=Plus/Minus
Query 76759 ACTTTA-TTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGT 76817
|||||| |||| || || | ||| |||||||| | | || ||||| || | |
Sbjct 241841 ACTTTAATTTTGGATTTGTCAACTGTGAACTGAATAGCGTTGGCGGCAGGTTTGGTTCTT 241782
Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGT 76877
| ||||||||| ||||| || || || | |||| | |||||||| || || |||
Sbjct 241781 AAATAGTACATTCCAGTCTTGAGCCCAATTTTCCAGGCATAGAAATGAATTGAAGTTAGT 241722
Query 76878 TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 76937
|| ||| |||| || |||| ||| ||||| | || ||||| || || || || |||
Sbjct 241721 TTCCCGTAATTAGGTTCTGCTACATGGATATTGAAAGATTGACTCTGGTCAATAAATGCT 241662
Query 76938 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 76997
|||||||| || ||||||| ||| ||||||| | ||| ||||| | ||||||| |
Sbjct 241661 CCTCTATCCGCAGCCATTTGAATAGTGGTCTTAACGGAAATCTCCCACACAGTTTTGTAC 241602
Query 76998 ACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATC-TGATAT 77053
| | | | || || | || | ||| ||||||| || |||||| | ||| ||
Sbjct 241601 AAATCTCTAATTTCTTGGGGTATATTTTCAATATTTTGGATAGAACCATTGTTATGA-AT 241543
Query 77054 AATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATG 77113
||| |||||| || || || | |||||| | | || ||| | || || | |||
Sbjct 241542 AATGACATTCTTCATGTCTTCGTCCCACAAGTCAGCTTGAGTCAAATCCCTGAGTAAATG 241483
Query 77114 AGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATA 77173
| |||| || | |||||||||||||||||| ||||| | |||||| || ||| |
Sbjct 241482 ATGATTCACCACTTGAAATTCTCCAGACAACACTCTTCTTTGGTAAATGTTTGATGTAAA 241423
Query 77174 TGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGC 77233
|||||| | |||||||||||||| | ||| || || ||||||||||||||||| || ||
Sbjct 241422 TGGTTCAAATGATTCATTGTTTCCGAGAATCTGTGCTGTAGAAGCAGTTGGCATTGGAGC 241363
Query 77234 CACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATC 77293
| ||| | ||| | || ||||| || ||||||||||| || | | |||| |
Sbjct 241362 TAGCAAAAGTGAATTGCGAAGGCCATGCTTTGCAATTTTATCTTTGAGCTCTGTCCAGTT 241303
Query 77294 CCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATA 77353
||||||||||| |||| | ||| | |||||||| || || || | ||| ||
Sbjct 241302 CCAAAGATCTGTAGGTGTTTTGTTCCACATGTCGTATTGAAGTATACCTTGACTGGCTGG 241243
Query 77354 TGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413
||| | || || || |||||| |||| |||||||||||||| |||||||
Sbjct 241242 ACTTCCTTCGTAAGTACTGTATACACCTTCTTTTTCTGCTAGTTCACAACTTGCTTCCAG 241183
Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCAATACTAT 77472
||||| || ||||| |||||||| |||| | ||| | || | | |||| ||| |
Sbjct 241182 AGCTCCATAGTAAATGGTTTCGAATATCTGTTGATTCA-ATAATATCGCTTTCTCACTTT 241124
Query 77473 CAAACGGATAATGT-AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATA 77531
|| | || | | | | || | ||| | || || | ||||||||| ||||||||||||
Sbjct 241123 CATA-GGGCAGTCTCATTAGGACAAATGTGTCGGCCAGTCCCTGAACACCAATACCAATA 241065
Query 77532 GGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATA 77591
|| || |||||| |||| ||| | ||||||||||| | ||||| | || | || |||
Sbjct 241064 GGCCTGTGTCTCATATTCGAATTCTTAGCTTCTGGTACTGGATAGAAGTTCACATCAATA 241005
Query 77592 ATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTT-AGTTTAAGAAA--ATCA 77648
||||| || | |||| | ||||| | || ||| | ||| |||| || |
Sbjct 241004 ATTTTGTTTAAATTTTGTGTGATGACTTTTGATATTTCTTTTAATTTTGTGAAATTATAA 240945
Query 77649 AATCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACC 77708
| | | || | |||||||| ||||||||||| || |||| |||||| || || ||
Sbjct 240944 GTTTTGTCTTCGTTTACAAACATATTCAAAGCTATTGAAGCTAAATTACATACAGCCACT 240885
Query 77709 TCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCC 77768
|||| | | |||| | || || ||||| ||||| || ||||| || || ||
Sbjct 240884 TCATCTTCAGAAGTGTATTCAACAATTTCAGTACAGAGATTGCTGCATTTAATCGTTCCT 240825
Query 77769 AGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCG 77828
| ||||| ||| ||||| || | ||||| ||||| || || | || | || || ||
Sbjct 240824 AAATTTTTTTGATTGCTTTTCCTGTTGCAGGAGTCTTTGTATAACATGTATGGTGTTCCA 240765
Query 77829 GTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC----TTTTATCATAGA 77884
|| || | || | ||| ||||||| |||||| | ||| ||| || || | |
Sbjct 240764 GTCTCTACTTGGGCTTCTATAATAGCTTTCCATAATACTTGAGCACGAACTTGTCTAACA 240705
Query 77885 TTTGTATCGCCTCTCTCTTTCATATTGAGTATATA--GCCGTTCAAATTCATCTCCCCAA 77942
| ||| |||| ||||||||| ||||| ||| ||||| || ||||||||
Sbjct 240704 TAATTAT----TCTCCTTTTCATATTTTTCATATAAGGCC--TCAAACTCTTCTCCCCAG 240651
Query 77943 ACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT- 78001
||| | ||| ||||| | || ||||||||||| ||||| |||| | | ||
Sbjct 240650 GTGTCAGTTAGTCCGGGGCAATTATGAGGGCACATCAAGCTCCAGTTTCCAT-TACTTTC 240592
Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061
||||| |||||| || | |||||||||||| | ||| ||| | || | | | |
Sbjct 240591 AACTCTTTTCATGAATAAATCAGGTATCCACAAGGCATAAAACAATTCCCTAGCACGAAC 240532
Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121
||| || || || ||||||||||| ||||| |||||||| | ||||| | |||||| ||
Sbjct 240531 TTCCTCTTTGCCAGTATTCTTTTTCAGATCCAGAAACTCAAATATATCCGCATGCCACGG 240472
Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 78181
||||| |||| ||| | | || || | ||||| ||||| ||||| | |||||| ||
Sbjct 240471 TTCTAAGTATACTGCAAATGCACCTGGCCTCTTATTTCCTCCTTGATCGACATATCTAGC 240412
Query 78182 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGA 78241
||||||||||| ||||| | ||| || | | ||| || || |||||||||||||
Sbjct 240411 TGTGTTATTATACACTCTGAGCATGGGTACTAGACCATTCGAAACACCATTTGTTCCAGC 240352
Query 78242 AATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCA 78297
|||| | || |||| | ||| |||||| || || || || || ||
Sbjct 240351 AATAGTTGTGCCTTTTGCTCTAAT----GCAATGGACATGCAATCCAATCCCACCAGCAG 240296
Query 78298 TCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCA 78357
|| ||||| | || || | || | ||||| || || |||||||| ||||||||
Sbjct 240295 ATTTTGATATCAAGGCACATTGCTTAAGAGTATCATATATTCCCTCTATGCTGTCATCTT 240236
Query 78358 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATG 78417
||||| | | ||| || || | |||| | | ||| | || || | |
Sbjct 240235 TCATGGCTATTAAAAAGCATGATGATAATTGAGGTTTGGGAGTGGCAGCTGAGAAGAGAG 240176
Query 78418 TCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATT 78477
| || ||||| ||||| |||||||||| |||| ||| || || | ||||||| |
Sbjct 240175 TTGGGCTGGCATGAGTAAAATATTTTTCAGACAGTAAATTATAAGTGTTGATAGCTGCAT 240116
Query 78478 CTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535
| || ||| ||| ||||| | | |||||||| | ||| ||||| || || ||
Sbjct 240115 CGATATCCTCCCCATGTATTCCAATTGAAACACGCATAAGCATGTGCTGTGGCCTCTC 240058
>seq33365
Length=5281
Score = 122 bits (134), Expect = 1e-22
Identities = 163/226 (72%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
||||||| ||||||||| ||| ||||| | || |||||||| || || || ||
Sbjct 3541 TCATCTCGTGAAATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCTTC 3600
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284
| ||| ||||||| || ||| |||||||||||||| || || || || ||||||||
Sbjct 3601 AACCAGAATATTGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATGCC 3660
Query 48285 GTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCC 48341
|| | |||||| || | || | | | |||||| | | |||||||| |||
Sbjct 3661 ACAATACGCTCTCCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTGCC 3720
Query 48342 TTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 48387
||| ||||||| || |||| ||||| ||||||||||| | |||||
Sbjct 3721 TTCCTCTTTACGCATGGCAGAGTTTCAATAGCATTAAACAAAAAGT 3766
>seq33683
Length=341392
Score = 96.9 bits (106), Expect = 5e-15
Identities = 234/352 (66%), Gaps = 3/352 (1%)
Strand=Plus/Minus
Query 170984 CCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTAAAAAATTTCCATCTGGA 171043
|| ||| | || | | | ||| | ||||| | | |||| | ||||| | ||| ||||
Sbjct 86078 CCAATGCTGGCTGCAGCTTGTAAATCTGTAGAAATGGCAATGAAAAAGTGTCCGAATGGA 86019
Query 171044 ATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTCATAAAAACAATAATAAT 171103
|||||| ||||| | ||||||||||||||| |||| ||||| ||||| || ||| |
Sbjct 86018 ATGTTTTCAGAAATTAAATATGATGGTGAAAGAGTGCAAGTACATAAGAAAGGTAAGGAG 85959
Query 171104 TTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATAAAGTTGATTATCTCAAG 171163
|| | ||| |||| | ||||| || | |||| ||||| | || ||||
Sbjct 85958 TTCAAATATTTTTCCAGAGCATTAAAACCTGTGATGGCACACAAAGTGAGTCATTTCAAA 85899
Query 171164 GAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTATTATCTTGGATTCCGAAATTGTT 171223
|| || |||||| |||||||| |||| | | | | || || ||| | ||| | |
Sbjct 85898 GATTATCTTCCTCAAGCATTTCCCAAAGGTGACGATCTAATATTAGATGCTGAAGTGTTA 85839
Query 171224 CTAGTTGA--TGAACA-TAATGTTCCACTTCCGTTTGGAAGTCTAGGAATACACAAAAAG 171280
| || || |||||| | | ||||| || ||||||| | || | ||||||| |
Sbjct 85838 ATGGTGGATGTGAACACTGGTAAGCCACTGCCATTTGGAACCTTGGGGAAACACAAACAT 85779
Query 171281 AAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTGATTGTTTATACT 171332
||| | |||| |||| | | ||||||| | ||||| || | ||||
Sbjct 85778 GCAGAATTCAAAGATGCACAAGTATGTTTGTATATATTTGACTGCCTTTACT 85727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694147372915360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |