Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21]
60,049 sequences; 728,788,927 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq33365 122 9e-23
>seq33365
Length=5281
Score = 122 bits (134), Expect = 9e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831
|||| | |||||||| || || | ||| |||||| ||||| |||| ||| || || ||
Sbjct 4383 ATCTCTGATATATGTGTCTATCAACAAAGAATACATCTCAGAGTGAACATTCTCCATGGC 4442
Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891
||| ||||| ||||| |||||||| ||||||| | ||| || || | | || || |
Sbjct 4443 AATTTGAAATCCATAGAAACATCTGGCTTCAGTGACTTGCACTTCTTGGGAGAACCTCTC 4502
Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951
| | |||||| || || || |||||| ||||||||||| || | |||| |||||
Sbjct 4503 CACAAGATTTTCATTGACTATCCCATCAGAGGCAGCAAAGAAGGCCAAGACATGCTTTAT 4562
Query 23952 AAAATGTCTTTC 23963
|||||| |||||
Sbjct 4563 AAAATGCCTTTC 4574
Score = 107 bits (118), Expect = 2e-18
Identities = 154/216 (71%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 23544 AATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATAT 23603
||| ||||||||| ||||| ||||| ||||||| || || || || | ||| |||||
Sbjct 3552 AATTAATTCATTACTGAATGTCAATCCAGGCATTAGGCCGCGCTTCTTCAACCAGAATAT 3611
Query 23604 TGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGT 23663
|| ||||| || |||||||| || ||||||||||| ||||| ||||||| |||
Sbjct 3612 TGATGCAAAACTGCCAGAAAAGAATATTCCCTCAACAGCTGCAAATGCCACAATACGCTC 3671
Query 23664 ACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTAC 23723
||||| |||||| | | || |||||| | | ||||| |||||| |||||
Sbjct 3672 TCCAAAAGTTGCACTCTTGCTAGCAATCCACTGCAGAGCCCAATCTGCCTTCCTCTTTAC 3731
Query 23724 ACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759
|| | |||||||| || || || | ||||||
Sbjct 3732 GCATGGCAGAGTTTCAATAGCATTAAACA-AAAAGT 3766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521096564588600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |