Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8255 98.7 1e-15 >seq8255 Length=582279 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16785 CGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTC 16844 || ||| ||||||||||| || ||||| || || |||||| | | || ||||||| Sbjct 398847 CGACGAACAATCTATCCGCAACGAATTCGATGTAGCTGCACATGAGTGTACAATTCATTC 398788 Query 16845 CTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCT 16904 |||| | | || || | |||| ||||||||| || || || | || || ||| Sbjct 398787 CTATCAATTGGACTGGTAATGCTTGTGTCAAAAATTCCTGTTCAATTTCTACAGCATCCA 398728 Query 16905 TAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGAC 16964 | ||||| || ||||| ||| ||| | ||| || ||||||||||| | || Sbjct 398727 TTATAATTGATTTCACACGTTCAAAGGATGGTTTTTGTACAATGTGTTTAAACATTAAAC 398668 Query 16965 ATGCGAAATCGCAATGTAATCCCT 16988 |||| ||||||||||||||||||| Sbjct 398667 ATGCAAAATCGCAATGTAATCCCT 398644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517475789567880