Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq10641 116 3e-21 >seq10641 Length=139898 Score = 116 bits (128), Expect = 3e-21 Identities = 184/262 (70%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 102005 CCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGA 102064 |||| ||| ||||||| | | | ||||||| || || || || || ||||| || Sbjct 121416 CCTTGTCCAGTATAATCTGTGCGGATATCTTTATACTCAGCACCAAAGTGTCTCCATTGG 121357 Query 102065 AATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACC--AAGTTTATCTA 102122 |||||||| |||||||| | ||| ||||| ||||| || || || ||| ||| | Sbjct 121356 AATCCATAGACAGGTCCCAAATCACCTTCCTCTCTATCTGTGAACCCGCAAGA--ATCCA 121299 Query 102123 AAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGC 102182 |||| | | || ||||| |||||||||| || || || |||| | |||||| Sbjct 121298 AAAAGGCACGTGAGCCATTTTCATCCCAAATATGAACACCCTTATCTGACAATTCTTTGG 121239 Query 102183 TGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTC 102242 | || ||||| |||||||||||| | ||||||||| || ||| ||| ||||||| Sbjct 121238 AATTTGTCGATCCCTTGATAAACCACAGTAATTCTTCAACTACTGCTCGCCAGAATACTC 121179 Query 102243 TCTTAGTAGTTAAAAGTGGAAA 102264 | || || || || | ||| || Sbjct 121178 TTTTGGTTGTCAATAATGGGAA 121157 Score = 87.8 bits (96), Expect = 1e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || |||||||| ||||| |||| | | ||||| || ||||| |||||||||||| Sbjct 121804 GTAACATGAGCGATCATATAAGTCAGTAAGGAATACGATGCTATGTTGAATGGCACTCCT 121745 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 || || || || || ||||||||| || || ||| | | || | | |||||| Sbjct 121744 AAACCTATGTCTGCGCTTCTTTGATAAAGCTGCGCGGACAATTCACCGTTATTTACATAA 121685 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCT 101920 ||||| || |||||||| ||||| || |||||| ||||||||| Sbjct 121684 AATTGTACCAAAACATGACATGGCGGTAATGCCATTTCTGGAATGTCT 121637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361203689935541