Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6884 109 5e-19 >seq6884 Length=256371 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||||||||||||| ||||||||||| || || | || || | | || Sbjct 112515 AGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCT 112456 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || ||| | || | ||| ||||| ||| || | |||||||| || Sbjct 112455 TCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCC 112396 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||| || | | | ||||| | |||| ||||| || |||||| Sbjct 112395 TGAATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTC 112336 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || || ||||||||||| || |||||| Sbjct 112335 TTTCCTGTCAAAGTTTTGACAAAGATCTGCATT 112303 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| |||||| ||||||||||| || || || | || || | ||||||||||||| Sbjct 112735 ATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGAGAGCGTGCGTCCGTCCTCCAGCTG 112676 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||||| || |||| | |||||| || || || | || || ||||| ||| || Sbjct 112675 CTTGCCAGCGAAAATCAATCTCTGTTGATCAGGAGGAATTCCCTCTTTGTCTTGGATTTT 112616 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || || | | | |||||| | ||| ||||| ||||| ||||| || || Sbjct 112615 GGCCTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAAAGTAATAGTCTTTCCTGT 112556 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 || ||||||||||| || ||||| Sbjct 112555 CAAGGTTTTGACAAAAATCTGCAT 112532 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| ||||| |||||||| |||||||| ||||| | || || || | || Sbjct 112971 AGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 112912 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || ||| | || | ||||||||| || || | ||||||||||| Sbjct 112911 TCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCCTTGTCC 112852 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || || ||| || | ||| || || | ||| ||||| || |||||| Sbjct 112851 TGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCACTTCCAATGTGATGGTC 112792 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | || ||||| || || ||||| Sbjct 112791 TTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| || || || |||||||| || || | Sbjct 114126 CCGCCGCGAAGCCTGAGGACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAG 114067 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || |||||||| || ||| | || | ||||||||| ||| || Sbjct 114066 AGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGG 114007 Query 21069 ACGCCTTCCTTGTC 21082 | |||||||||||| Sbjct 114006 ATGCCTTCCTTGTC 113993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422203666449356