Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq10641 140 2e-28 >seq10641 Length=139898 Score = 140 bits (154), Expect = 2e-28 Identities = 186/254 (73%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 97369 CCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTG 97427 |||| |||| ||||| ||||| | | ||| ||| || || ||||| || |||||||| Sbjct 121416 CCTTGTCCAGTATAATCTGTGCGGAT-ATCTTTATACTCAGCACCAAAGTGTCTCCATTG 121358 Query 97428 GAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACC--AAGCTTATCT 97485 ||||||||| |||||||| | || ||||| |||||||| ||| || ||| ||| Sbjct 121357 GAATCCATAGACAGGTCCCAAATCACCTTCCTCTCTATCTGTGAACCCGCAAGA--ATCC 121300 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTG 97545 ||| ||| | || |||||| |||||||||| || ||||| ||| | |||||| Sbjct 121299 AAAAAGGCACGTGAGCCATTTTCATCCCAAATATGAACACCCTTATCTGACAATTCTTTG 121240 Query 97546 CTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACT 97605 | || ||||| |||||||||||| |||||||| || || ||| ||| |||||| Sbjct 121239 GAATTTGTCGATCCCTTGATAAACCACAGTAATTCTTCAACTACTGCTCGCCAGAATACT 121180 Query 97606 CTCTTAGTTGTTAA 97619 || || ||||| || Sbjct 121179 CTTTTGGTTGTCAA 121166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346738392593870