Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7770 89.7 3e-13 >seq7770 Length=449423 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || || || ||||| || || | | | || || | ||| || || || || Sbjct 86913 TTCCTTTTGAATATTATAGTCAGAAAGAGTTCTGCCATCTTCTAGCTGTTTACCAGCAAA 86972 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 |||||| || ||||| ||| || | | |||||||| || ||||||||| | || Sbjct 86973 AATGAGACGTTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGGAT-TTTTGCTTTTACAT 87031 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 |||| | ||| | | |||||| || | || ||||||||||| || |||||||||| Sbjct 87032 TCTCTATGGTATCTGAAGCTTCGACTTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCA 87091 Query 34377 CAAAGATCTGCAT 34389 |||| |||||||| Sbjct 87092 CAAAAATCTGCAT 87104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323029511084960