Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7770 131 1e-25 seq6884 120 3e-22 seq8255 86.0 6e-12 >seq7770 Length=449423 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || ||||| || || || |||||||| ||||| |||| || ||| | || Sbjct 88244 ATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCT 88185 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| ||||| | || || || ||| Sbjct 88184 GACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCAG 88125 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || || ||||||||||| | ||||| || |||| | ||||||||| Sbjct 88124 CAGCGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAAC 88065 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || |||||||| |||||||| ||||| || Sbjct 88064 ATCCAGAAAGAATCCACTCTTCACCTGGTTCT 88033 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || ||||| || || || |||||||| ||||| |||| || ||| | || Sbjct 87560 ATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCT 87501 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| ||||| | || || || || Sbjct 87500 GACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCAA 87441 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| |||| || ||||| ||||| ||||||||| ||| | ||||||||| Sbjct 87440 CAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAAC 87381 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || ||||||||||| || Sbjct 87380 ATTCAGAAAGAATCCACACTTCATCTGGTTCT 87349 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || || || || || ||||| |||||| | || || ||| | || Sbjct 88701 CATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTC 88642 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | |||||| | ||| || || |||||| | || || || || Sbjct 88641 CGACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCA 88582 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || ||||| ||||| ||||||| || ||| | || ||||| Sbjct 88581 GCAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAA 88522 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || |||||||| || ||||||||||| Sbjct 88521 TATCCAGAAAGAATCTACACTTCATCTGGT 88492 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || ||||| || || || |||||||| ||||| |||| || ||| | || Sbjct 87788 ATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCT 87729 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| ||||| | || || || || Sbjct 87728 GACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCAA 87669 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| |||| || ||||| ||||| ||||||||| ||| | ||||||||| Sbjct 87668 CAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAAC 87609 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || |||||| | || || Sbjct 87608 ATTCAGAAAGAATCCACACTTCATTTAGTTCT 87577 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || ||||||||||| || || | || || ||| | || Sbjct 88016 ATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTCT 87957 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| ||||| | || || || ||| Sbjct 87956 GACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCAG 87897 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || || ||||| ||||| | ||||| || |||| | ||||||||| Sbjct 87896 CAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAAC 87837 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 || || |||||||| || ||||| Sbjct 87836 ATCCAGAAAGAATCTACACTTCA 87814 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| ||||||||||| || || | || || ||| | || Sbjct 88472 ATGCAGATCTTTGTGAAGACTCTTACAGGCAAAACTATTACTCTTGAAGTAGAAGCTTCA 88413 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| ||||| | || || || ||| Sbjct 88412 GACACCATAGAAAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCCCCGGATCAG 88353 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || || ||||| |||||| | ||||| || |||| | ||||||||| Sbjct 88352 CAGCGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGTAGGACTCTTTCTGATTATAAC 88293 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 || || |||||||| || ||||| Sbjct 88292 ATCCAGAAAGAATCTACACTTCA 88270 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || ||||| ||||| | || || ||| | || Sbjct 87332 ATGCAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTCA 87273 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | |||||| | || ||||| |||||| | || || || || Sbjct 87272 GATACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCAA 87213 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| |||| || ||||| ||||| ||||||| || ||| | || ||||| Sbjct 87212 CAGCGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAAT 87153 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || |||||||| || ||||||||||| Sbjct 87152 ATCCAGAAAGAATCTACACTTCATCTGGT 87124 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || ||||| ||||||||||| || || | || || ||| | || Sbjct 87104 ATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTCA 87045 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || ||| | ||| ||||||||||| | || ||||| ||| Sbjct 87044 GATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCAG 86985 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || ||||| |||||| | ||||| | ||| | || ||||| Sbjct 86984 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAAT 86925 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 |||||||| ||||| || ||||| Sbjct 86924 ATTCAAAAGGAATCTACACTTCA 86902 >seq6884 Length=256371 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||||| || || ||||| ||||| | || |||||| | || Sbjct 113900 ATGCAAATTTTTGTCAAGACTCTCACTGGTAAAACTATCACATTAGAAGTTGAAGCATCA 113959 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| |||||| | ||| ||||||||||||| | || || || ||| Sbjct 113960 GACACGATAGAAAATGTCAAAGCAAAAATTCAGGACAAGGAAGGCATCCCTCCGGATCAG 114019 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| |||||| | ||||| | || | ||||| ||| Sbjct 114020 CAGAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGTCGTACACTCTCTGATTACAAC 114079 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| ||| | ||| | || || || || | ||||||| Sbjct 114080 ATTCAGAAAGAATCTACTTTGCATTTAGTCCTCAGGCTTCGCGGCGGTA 114128 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| | || || ||||| || || |||| |||||| | || Sbjct 112075 CATGCAGATTTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTCGAAGTTGAAGCCTC 112134 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || || || ||| | |||||| || || | || || |||| Sbjct 112135 TGACACCATCGAGAACGTAAAGGCAAAGATTCA-GGACAAAGAGGGTATTCCACCTGACC 112193 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||| | || || ||||| ||||| | |||||| || || ||||||| Sbjct 112194 AGCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGACGGACGTACCTTGTCTGATTATA 112253 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | || ||||| ||||| ||||||||| |||| || ||| || | ||||| Sbjct 112254 ATATCCAAAAGGAATCCACTCTTCATTTGGTCCTCAGATTGCGTGGCGG 112302 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || ||| ||||||||||||| ||||| | || || ||| | || Sbjct 114128 ATGCAGATTTTCGTCAAAACTTTGACAGGCAAAACTATCACTTTGGAGGTAGAAGCTTCA 114187 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| || ||| ||||| || ||| | || || || ||| Sbjct 114188 GATACAATCGAGAATGTCAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 114247 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || ||||| || | || ||| || || |||||||| Sbjct 114248 CAGAGATTGATTTTTGCGGGCAAGCAACTCGAGGACGGACGCACATTGTCAGATTATAAT 114307 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| |||||||| || | ||||| |||||| |||| || ||||| Sbjct 114308 ATTCAGAAAGAATCCACATTACATCTTGTACTTCGACTTAGAGGCGG 114354 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || ||||| | || || ||| | || Sbjct 112760 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACCATCACATTGGAAGTGGAAGCATCA 112819 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | ||| |||||||||||| | || || || ||| Sbjct 112820 GACACAATCGAGAACGTCAAAGCTAAAATTCAGGACAAGGAAGGTATCCCTCCAGATCAG 112879 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| |||||| | ||||| || | ||| || ||| Sbjct 112880 CAGAGATTGATCTTTGCTGGAAAACAGCTCGAAGATGGCCGCACACTCTCCGACTACAAC 112939 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || |||||| | ||| |||| ||| Sbjct 112940 ATTCAGAAGGAGTCGACTTTACATTTGGTCCTT 112972 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||| ||||||| || || ||||| | || || || | || Sbjct 112304 ATGCAGATCTTTGTCAAAACTTTGACAGGAAAGACCATCACGTTGGAAGTGGAGGCATCA 112363 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | |||||| || ||| | ||| |||||||| | || || || || Sbjct 112364 GATACAATTGAGAATGTCAAAGCAAAGATTCA-GGATAAGGAAGGTATCCCACCGGATCA 112422 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | |||| || ||||| |||||| | ||||| | || | |||||| || Sbjct 112423 GCAAAGATTAATCTTTGCTGGAAAACAGCTTGAAGATGGTCGCACGCTTTCCGATTACAA 112482 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||| || ||| | ||| |||| ||| | || | || |||| Sbjct 112483 CATTCAAAAAGAGTCCACTTTGCATTTGGTTCTTCGTCTACGTGGTGGTA 112532 >seq8255 Length=582279 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 57669 GAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAAC 57728 || ||| | ||||| || || ||||| || || || || || ||||| || ||||| Sbjct 397877 GAAAGATACTTTATCTCTCATGTCTTGGCATTCTTTGCTGCTTCTGATGGAATCGTTAAT 397936 Query 57729 GAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTAC 57788 |||||| || | || ||||| |||||||| || | | || || | || || || Sbjct 397937 GAGAATCTGATTGAGAGATTCAGTCAAGAAGTAAAAATTGCTGAAGCACGTTGTTTCTAT 397996 Query 57789 GGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACG 57848 ||||| ||| | ||||| || ||| | ||||| ||||||||||| | || || || || Sbjct 397997 GGATTCCAAATTGCCATAGAGAACATTCATTCTGAAATGTATTCCTTGCTTATTGAAACA 398056 Query 57849 TA 57850 || Sbjct 398057 TA 398058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445706271684720