Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10641 118 2e-21 >seq10641 Length=139898 Score = 118 bits (130), Expect = 2e-21 Identities = 180/255 (71%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 35234 ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGC 35293 || ||||| | | | |||||| ||| ||| || |||||| | |||||| |||| ||| Sbjct 121169 ACAACCAAAAGAGTATTCTGGCGAGCAGTAGTTGAAGAATTACTGTGGTTTATCAAGGGA 121228 Query 35294 AATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 ||| | ||||||||||| | | ||| | || || ||| | | ||||| || Sbjct 121229 TCGACAAATTCCAAAGAATTGTCAGATAAGGGTGTTCATATTTGGGATGAAAATGGCTCA 121288 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 || | |||||||| | | ||||| ||||||| || || ||||||||||| || Sbjct 121289 CGTGCCTTTTTGGATTCTTGCGGGTTCACAGATAGAGAGGAAGGTGATTTGGGACCTGTC 121348 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT---GATACCTGTTCTTCCGATTAT 35470 || |||||||||||| | || ||||||||||| ||| |||| | | | |||||| Sbjct 121349 TATGGATTCCAATGGAGACACTTTGGTGCTGAGTATAAAGATATCCG---CACAGATTAT 121405 Query 35471 ACTGGAAAGGGTATT 35485 |||||| | |||||| Sbjct 121406 ACTGGACAAGGTATT 121420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989447180425405