Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq2959 219 2e-52 >seq2959 Length=324591 Score = 219 bits (242), Expect = 2e-52 Identities = 363/523 (69%), Gaps = 6/523 (1%) Strand=Plus/Minus Query 3618 ATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGT 3677 |||| || | |||||||| || ||||| || ||||| ||||||||||| || ||||| | Sbjct 124224 ATGATTTACTGTATTTTGCCGATGTATGTGCCGGTCCGGGTGGTTTCAGCGAGTATATTT 124165 Query 3678 TATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATT 3737 ||| ||||| |||||| || |||||| | ||| | || ||| | ||||||| | Sbjct 124164 TATCTAGAAAAAAATGGCATGCCAAAGGATTTGGATTCACTTTAAAAAACGAAAATGACT 124105 Query 3738 TTCAACTGAACAGATTTTACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGC 3797 || | || | ||| | | | | |||||||| || || | ||||||| | Sbjct 124104 TTACATTGGATGAATTCTTTGCTGGTCCATGTGAAACTTTTCATCCTTTTTATGGTTC-- 124047 Query 3798 TTAACGA---TGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTA 3854 ||| || ||| || | | || |||||||||| ||| ||| | |||| | Sbjct 124046 -TAAAGAAAATGGAGATGTATTTGATCCACAAAATCAAGAAGAATTTAGATCTTTGATAA 123988 Query 3855 TGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTG 3914 ||||| | || | || ||||||||||||||||||||| | || || || || || || | Sbjct 123987 TGAAACACACATATGGCAAAGGTGTACATTTTATGATGTCAGATGGAGGATTTTCCGTGG 123928 Query 3915 AGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAA 3974 | ||||||||||| || |||||||| |||| ||| || | ||| ||||||| ||| | Sbjct 123927 AAGGTCAAGAAAACATACAAGAAATTCTATCTAAACAGTTATATCTGTGTCAGTGTCTGG 123868 Query 3975 TTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTA 4034 | ||||| ||||| | || ||||| |||| ||| | ||||| || ||| | || | Sbjct 123867 TGGCATTAATGATAGTGAGACCAGGTGGCCATTTTGTAACAAAATTGTTTGATTTGTTCA 123808 Query 4035 CACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTT 4094 ||||||| || ||| | || ||| | ||||| |||| |||| | |||||| || | Sbjct 123807 CACCTTTCAGCATTGGACTTGTTTATCTAATGTACAGATGTTTTGAAAATATTTGCATCT 123748 Query 4095 TCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 |||| || || || | || || ||||| ||| | ||||| Sbjct 123747 TCAAGCCCAATAGTTCTAGGCCAGCTAATTCAGAACGTTATTT 123705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276517228966873