Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq10641 100 7e-16 >seq10641 Length=139898 Score = 100 bits (110), Expect = 7e-16 Identities = 139/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 111357 GTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAA 111416 || |||||| | ||||||||||| ||| |||||| | || ||| | ||| || Sbjct 121199 GTTGAAGAATTACTGTGGTTTATCAAGGGATCGACAAATTCCAAAGAATTGTCAGATAAG 121258 Query 111417 AATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTG-GTCTTGT 111475 ||| | |||||||||| |||||| ||||||| |||| | ||||| ||| | || Sbjct 121259 GGTGTTCATATTTGGGATGAAAATGGCTCACGTGCCTTTTTGGATTC--TTGCGGGTTCA 121316 Query 111476 C-GACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTG 111534 | || | || ||||||||| | ||||| || || ||||| |||||| | |||||||||| Sbjct 121317 CAGATAGAGAGGAAGGTGATTTGGGACCTGTCTATGGATTCCAATGGAGACACTTTGGTG 121376 Query 111535 CAGACTACAAA 111545 | || || ||| Sbjct 121377 CTGAGTATAAA 121387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303173398738562