Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq7770 118 9e-22 seq6884 114 1e-20 >seq7770 Length=449423 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| | ||||||||| | || || | ||||| || || Sbjct 87333 AATGCAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTC 87274 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | |||||| |||||| |||||||||||||| ||||| ||||| Sbjct 87273 AGATACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCA 87214 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | | |||| | || || ||||| ||||||| |||| | || ||||| Sbjct 87213 ACAGCGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAA 87154 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || |||||||||||| ||||| | || || Sbjct 87153 TATCCAGAAAGAATCTACACTTCATCTGGTCTT 87121 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||||||| | || ||| | || || || || | Sbjct 88700 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTCC 88641 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | |||||| ||||| || ||||||||||| ||||| ||||| Sbjct 88640 GACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCAG 88581 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | || || ||||| ||||||| |||| | || ||||| Sbjct 88580 CAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAAT 88521 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || |||||||||||| ||||| | || || Sbjct 88520 ATCCAGAAAGAATCTACACTTCATCTGGTTTT 88489 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||||||| | || || ||| | || || |||||||||| || Sbjct 87789 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87730 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| || || ||||||||||| || ||||| ||||| Sbjct 87729 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87670 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGTCAGCGATTATA 24168 ||| | | |||| | || || ||| | ||||| ||| || | | | ||||||| Sbjct 87669 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCG-GATTATA 87611 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||| |||||||| ||| |||||||||| Sbjct 87610 ACATTCAGAAAGAATCCACACTTCATTTAGT 87580 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| | || || ||| | ||||| | |||||||| || Sbjct 87105 AATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 87046 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || ||||| ||| | || ||| ||| || ||||| ||||| || ||||||||||| Sbjct 87045 AGATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCA 86986 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | || |||| | || || || || ||||||| ||||| | || ||||| Sbjct 86985 GCAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAA 86926 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||| ||||||||| |||| ||||| || Sbjct 86925 TATTCAAAAGGAATCTACACTTCACTTAGTTTT 86893 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || ||| | || || ||| | ||||| | |||||||| || Sbjct 88017 AATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTC 87958 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| || || ||||||||||| || ||||| ||||| Sbjct 87957 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 87898 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||||| | || || ||||| ||||||| || | | |||||||| Sbjct 87897 GCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 87838 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || |||||||||||| |||| ||||| Sbjct 87837 CATCCAGAAAGAATCTACACTTCACTTAGT 87808 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||||||| | || || ||| | || || |||||||||| || Sbjct 88245 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 88186 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| || || ||||||||||| || ||||| ||||| Sbjct 88185 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 88126 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||||| | ||||| ||||| ||||||| || | | |||||||| Sbjct 88125 GCAGCGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 88066 Query 24170 CATTCAAAAAGAATCTACAATTCA 24193 ||| || |||||||| || |||| Sbjct 88065 CATCCAGAAAGAATCCACTCTTCA 88042 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||||||| | || || ||| | || || |||||||||| || Sbjct 87561 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87502 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| || || ||||||||||| || ||||| ||||| Sbjct 87501 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87442 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGTCAGCGATTATA 24168 ||| | | |||| | || || ||| | ||||| ||| || | | | ||||||| Sbjct 87441 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCG-GATTATA 87383 Query 24169 ACATTCAAAAAGAATCTACAATTCAT 24194 ||||||| |||||||| ||| ||||| Sbjct 87382 ACATTCAGAAAGAATCCACACTTCAT 87357 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | || || ||| | ||||| | ||||| || || Sbjct 88473 AATGCAGATCTTTGTGAAGACTCTTACAGGCAAAACTATTACTCTTGAAGTAGAAGCTTC 88414 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 88413 AGACACCATAGAAAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCCCCGGATCA 88354 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||||| | || || || || ||||||| || | | |||||||| Sbjct 88353 GCAGCGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGTAGGACTCTTTCTGATTATAA 88294 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || |||||||||||| |||| ||||| Sbjct 88293 CATCCAGAAAGAATCTACACTTCACTTAGT 88264 >seq6884 Length=256371 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || |||||||||||| | || || ||||||| || ||| Sbjct 112076 ATGCAGATTTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTCGAAGTTGAAGCCTCT 112135 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||||| |||||||| || || || || || || Sbjct 112136 GACACCATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCACCTGACCAG 112195 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||||| | || || ||||| ||||| | | | | | |||||||| Sbjct 112196 CAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGACGGACGTACCTTGTCTGATTATAAT 112255 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || ||||| ||||| || ||||||| || | |||||| | || ||| Sbjct 112256 ATCCAAAAGGAATCCACTCTTCATTTGGTCCTCAGATTGCGTGGCGGA 112303 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || || ||||| | ||||| | ||||| ||||| Sbjct 112532 ATGCAGATTTTTGTCAAAACCTTGACAGGAAAGACTATTACTTTGGAAGTAGAGGCTTCT 112591 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || || || || |||||||| || || ||||| |||||| Sbjct 112592 GATACGATTGAGAATGTTAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCTGATCAA 112651 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| || |||||||| || || || | | | || |||||| || Sbjct 112652 CAGAGATTGATTTTCGCTGGCAAGCAGCTGGAGGACGGACGCACGCTCTCCGATTACAAT 112711 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | |||||||| ||| || | | ||||| Sbjct 112712 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 112758 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| ||| | || || | ||||| || || Sbjct 113900 ATGCAAATTTTTGTCAAGACTCTCACTGGTAAAACTATCACATTAGAAGTTGAAGCATCA 113959 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| ||| ||| ||||| |||||||| ||||| ||||| Sbjct 113960 GACACGATAGAAAATGTCAAAGCAAAAATTCAGGACAAGGAAGGCATCCCTCCGGATCAG 114019 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || || || || ||||||| | | || ||||| ||| Sbjct 114020 CAGAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGTCGTACACTCTCTGATTACAAC 114079 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| ||||||||||| | |||||||| Sbjct 114080 ATTCAGAAAGAATCTACTTTGCATTTAGT 114108 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || ||| | || || | |||||||| || Sbjct 112988 ATGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113047 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| || ||| || ||||||||||| ||||| |||||| Sbjct 113048 GATACGATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGATCAA 113107 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTATA 24168 |||||| | |||| | || || ||||||||||| | | | | |||| ||||| | Sbjct 113108 CAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCA--GATTACA 113165 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | |||||||| ||||| || | |||||||| ||| || | | ||||| Sbjct 113166 ATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113214 Score = 102 bits (112), Expect = 7e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| || || || ||| | || || | || || || || Sbjct 114128 ATGCAGATTTTCGTCAAAACTTTGACAGGCAAAACTATCACTTTGGAGGTAGAAGCTTCA 114187 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || |||||| | ||||| || ||| |||||||| ||||| ||||| ||||| Sbjct 114188 GATACAATCGAGAATGTCAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 114247 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGA-AACGTCAGCGATTATA 24168 |||||| |||||| | |||||||||||||| || ||| | | |||| ||||||| Sbjct 114248 CAGAGATTGATTTTTGCGGGCAAGCAACTCGAGGACGGACGCACATTGTCA--GATTATA 114305 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | ||||| |||||||| ||| | ||| | || | || | ||||| || Sbjct 114306 ATATTCAGAAAGAATCCACATTACATCTTGTACTTCGACTTAGAGGCGG 114354 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || ||| | || || | |||||||| || Sbjct 113444 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113503 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| ||| ||| || ||||||||||| ||||| ||||| Sbjct 113504 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGATCAG 113563 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || ||||||| |||||| | | | | | ||||| || Sbjct 113564 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAAT 113623 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | |||||||| ||| || | | ||||| Sbjct 113624 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113670 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| || || ||||| | || || | ||||| ||||| Sbjct 112303 AATGCAGATCTTTGTCAAAACTTTGACAGGAAAGACCATCACGTTGGAAGTGGAGGCATC 112362 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | |||||| ||||||| || || ||||| || || || ||||| Sbjct 112363 AGATACAATTGAGAATGTCAAAGCAAAGATTCAGGATAAGGAAGGTATCCCACCGGATCA 112422 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || ||| | || | | || || || || ||||||| | | | |||||| || Sbjct 112423 GCAAAGATTAATCTTTGCTGGAAAACAGCTTGAAGATGGTCGCACGCTTTCCGATTACAA 112482 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||||| || || | ||||| || Sbjct 112483 CATTCAAAAAGAGTCCACTTTGCATTTGGT 112512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429879456832605