Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7770 102 7e-17 seq6884 100 2e-16 seq699 98.7 8e-16 >seq7770 Length=449423 Score = 102 bits (112), Expect = 7e-17 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 115269 TTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCG 115328 ||||| ||||| | |||||||| ||||| ||||| || || ||||||||||| ||| Sbjct 88717 TTTATTCTAGATTCATCATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCC 88658 Query 115329 TCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAG 115388 | || || | ||||||| | | | || ||| || || |||||||||| Sbjct 88657 TTGAGGTAGAAGCTTCCGACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAG 88598 Query 115389 GCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAA 115448 || | || ||||||||| | || || | ||| || |||||| | ||||||| | || Sbjct 88597 GCATTCCTCCTGATCAGCAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAA 88538 Query 115449 CCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAG 115508 | | | || ||||| || || ||||| ||||| | ||| |||| ||| | | || | Sbjct 88537 CTCTTTCTGACTATAATATCCAGAAAGAATCTACACTTCATCTGGTTTTGCGTCTTCGTG 88478 Query 115509 GAGGAA 115514 |||||| Sbjct 88477 GAGGAA 88472 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA-ACGGAG-TCC 115342 |||||| |||||||| ||||| || || || ||||||||||| | ||| || || | | Sbjct 87105 AATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 87046 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | || || | | | |||||| |||||| || || ||||| | || ||| Sbjct 87045 A--GATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGAT 86988 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||| | || |||| ||| || ||||| ||||||||| || ||| | | || ||| Sbjct 86987 CAGCAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTAT 86928 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| || ||||| | || | || ||| || | || ||||| Sbjct 86927 AATATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGTGGAGG 86878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| ||||| |||||||| ||||| || || ||||| || | Sbjct 87561 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87502 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | |||||| ||||| || |||||||| | || |||||| Sbjct 87501 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87442 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| || |||||||| ||||| | || | | |||||||| Sbjct 87441 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAA 87382 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| ||||| || || | ||| |||| || | | ||||| |||| Sbjct 87381 CATTCAGAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGTGGAA 87332 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| ||||| |||||||| ||||| || || ||||| || | Sbjct 87789 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87730 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | |||||| ||||| || |||||||| | || |||||| Sbjct 87729 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87670 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| || |||||||| ||||| | || | | |||||||| Sbjct 87669 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAA 87610 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| ||||| || || | ||| | || || | | |||||||||| Sbjct 87609 CATTCAGAAAGAATCCACACTTCATTTAGTTCTGCGTCTTCGAGGAGGAA 87560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| ||||| |||||||| ||||| || || ||||| || | Sbjct 88245 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 88186 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | || ||| ||||| || |||||||| | || ||||| Sbjct 88185 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 88126 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| ||||||||| | ||||||| | || | | |||||||| Sbjct 88125 GCAGCGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 88066 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| || ||||| || ||| | || |||| || | | |||||||||| Sbjct 88065 CATCCAGAAAGAATCCACTCTTCACCTGGTTCTGCGTCTTCGAGGAGGAA 88016 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || ||||| || ||||| ||||| | ||| || | Sbjct 88017 AATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTC 87958 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | || ||| ||||| || |||||||| | || ||||| Sbjct 87957 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 87898 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| || |||||| | ||||||| | || | | |||||||| Sbjct 87897 GCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 87838 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| || ||||| ||||| | || | || || | | |||||||||| Sbjct 87837 CATCCAGAAAGAATCTACACTTCACTTAGTTCTGCGTCTTCGAGGAGGAA 87788 >seq6884 Length=256371 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||||||||| | || ||||| ||||| || | ||| |||| | Sbjct 112303 AATGCAGATCTTTGTCAAAACTTTGACAGGAAAGACCATCACGTTGGAAGTGGAGGCATC 112362 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | || ||| ||| ||| ||||| ||||| |||| ||||| Sbjct 112363 AGATACAATTGAGAATGTCAAAGCAAAGATTCAGGATAAGGAAGGTATCCCACCGGATCA 112422 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | || | ||| || ||||| | ||||||| || | ||||||| || Sbjct 112423 GCAAAGATTAATCTTTGCTGGAAAACAGCTTGAAGATGGTCGCACGCTTTCCGATTACAA 112482 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||||||||| ||| | ||| |||| Sbjct 112483 CATTCAAAAAGAGTCCACTTTGCATTTGGT 112512 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || ||| | || ||||||||||| || ||||| || || Sbjct 112076 ATGCAGATTTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTCGAAGTTGAAGCCTCT 112135 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | ||||| ||| ||| || ||||| || | || ||| ||| Sbjct 112136 GACACCATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCACCTGACCAG 112195 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | | |||| ||| || |||||| | ||||| | ||| || | |||||||| Sbjct 112196 CAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGACGGACGTACCTTGTCTGATTATAAT 112255 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || ||||| || || ||| | ||| |||| | |||||||| || |||| Sbjct 112256 ATCCAAAAGGAATCCACTCTTCATTTGGTCCTCAGATTGCGTGGCGGAA 112304 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || ||||| || ||||| || || | ||| || | Sbjct 113900 ATGCAAATTTTTGTCAAGACTCTCACTGGTAAAACTATCACATTAGAAGTTGAAGCATCA 113959 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| ||||||| || || |||||| |||| |||||| Sbjct 113960 GACACGATAGAAAATGTCAAAGCAAAAATTCAGGACAAGGAAGGCATCCCTCCGGATCAG 114019 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | ||| || ||||| | ||||||| || | | ||||| ||| Sbjct 114020 CAGAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGTCGTACACTCTCTGATTACAAC 114079 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 ||||| ||||| |||||| | ||| Sbjct 114080 ATTCAGAAAGAATCTACTTTGCAT 114103 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CGGAGTCCAG 115344 ||||| ||||||||||| || || || || ||||| || || | ||| || || || Sbjct 112988 ATGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAG--CAT 113045 Query 115345 C-GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | || || | | || || || ||| |||||| |||||||||||| | || ||| Sbjct 113046 CAGATAC-GATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGAT 113104 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || || ||| | |||| ||| || |||||| | ||||| | | || || | ||||| Sbjct 113105 CAACAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCAGATTAC 113164 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| || || ||| | ||| | || || || | || ||||| Sbjct 113165 AATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113214 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CGGAGTCCAG 115344 ||||| ||||||||||| || ||||| || ||||| || || | |||| || || || Sbjct 113216 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAATCGAAG--CAT 113273 Query 115345 C-GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | || || | | || || || ||| ||||||| | |||||||||| || | ||| Sbjct 113274 CTGATAC-GATAGAGAATGTTAAAGCAAAAATTCAGGTTAAAGAAGGCATCACTCCGGAT 113332 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| ||| | || | ||| | |||||| | ||||| | || || | ||||| Sbjct 113333 CAGCAGAGATTGATCTTTGCTGTAAAACAACTCGAAGACGGTCGCACTTTGTCAGATTAC 113392 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| || || ||| | ||| | || || || | || ||||| Sbjct 113393 AATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113442 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CGGAGTCCAG 115344 ||||| ||||||||||| || ||||| || ||||| || || | ||| || || || Sbjct 113444 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAG--CAT 113501 Query 115345 C-GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | || || | | || || || ||| ||||||| |||||||||||| |||| ||| Sbjct 113502 CAGATAC-GATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGAT 113560 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| ||| | || | ||| || || ||| ||||| | ||| | | ||||| Sbjct 113561 CAGCAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTAC 113620 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| || || ||| | ||| | || || || | || ||||| Sbjct 113621 AATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113670 >seq699 Length=139783 Score = 98.7 bits (108), Expect = 8e-16 Identities = 145/205 (71%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| || ||||| ||||| || || ||||| || |||| || || Sbjct 6154 ATGCAGATTTTCGTGAAAACCCTCACTGGTAAGACCATCACTCTCGAGGTCGAAGCCTCT 6095 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || ||| || || |||||||| || |||| |||||| Sbjct 6094 GATACCATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAGGGAATCCCACCAGATCAG 6035 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| ||||||| | ||| ||||||||||||||||||| || | | ||||||||| Sbjct 6034 CAACGACTTATCTTTGCTGGCAAACAATTAGAAGATGGACGTACTCTCTCTGATTATAAC 5975 Query 115466 ATTCAAAAAGAGTCTACTATACATA 115490 |||||||||| ||||||| ||| Sbjct 5974 ATTCAAAAAG---GTACTATATATA 5953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425288060750920